Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5BP61020 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
RAB5BP61020 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB5BP61020 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5BP61020 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB5BP61020 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
RAB5BP61020 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5BP61020 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RAB5BP61020 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.37■□□□□ 0.53
RAB5BP61020 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5BP61020 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5BP61020 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RAB5BP61020 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RAB5BP61020 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5BP61020 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
RAB5BP61020 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5BP61020 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5BP61020 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.36■□□□□ 0.53
RAB5BP61020 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5BP61020 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5BP61020 AP003733.4-201ENST00000623785 1697 ntBASIC18.36■□□□□ 0.53
RAB5BP61020 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
RAB5BP61020 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5BP61020 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RAB5BP61020 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5BP61020 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB5BP61020 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5BP61020 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5BP61020 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5BP61020 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RAB5BP61020 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.35■□□□□ 0.53
RAB5BP61020 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5BP61020 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RAB5BP61020 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RAB5BP61020 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5BP61020 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
RAB5BP61020 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5BP61020 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.34■□□□□ 0.53
RAB5BP61020 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5BP61020 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RAB5BP61020 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5BP61020 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5BP61020 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RAB5BP61020 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RAB5BP61020 AC141586.4-201ENST00000624558 1573 ntBASIC18.34■□□□□ 0.53
RAB5BP61020 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB5BP61020 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB5BP61020 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.53
RAB5BP61020 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB5BP61020 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RAB5BP61020 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB5BP61020 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.33■□□□□ 0.53
RAB5BP61020 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB5BP61020 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RAB5BP61020 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB5BP61020 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB5BP61020 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RAB5BP61020 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB5BP61020 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.33■□□□□ 0.52
RAB5BP61020 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RAB5BP61020 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5BP61020 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5BP61020 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5BP61020 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RAB5BP61020 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5BP61020 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5BP61020 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5BP61020 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5BP61020 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5BP61020 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RAB5BP61020 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB5BP61020 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RAB5BP61020 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RAB5BP61020 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RAB5BP61020 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RAB5BP61020 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.31■□□□□ 0.52
RAB5BP61020 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB5BP61020 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
RAB5BP61020 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.3■□□□□ 0.52
RAB5BP61020 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB5BP61020 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RAB5BP61020 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RAB5BP61020 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.3■□□□□ 0.52
RAB5BP61020 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB5BP61020 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
RAB5BP61020 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RAB5BP61020 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB5BP61020 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB5BP61020 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB5BP61020 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RAB5BP61020 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms