Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 KTI12YKL110C 942 nt6.46□□□□□ -1.38
RTR1P40084 SKG1YKR100C 1068 nt6.46□□□□□ -1.38
RTR1P40084 MET8YBR213W 825 nt6.46□□□□□ -1.38
RTR1P40084 VHT1YGR065C 1782 nt6.46□□□□□ -1.38
RTR1P40084 VID30YGL227W 2877 nt6.46□□□□□ -1.38
RTR1P40084 YJL107CYJL107C 1164 nt6.45□□□□□ -1.38
RTR1P40084 THP1YOL072W 1368 nt6.44□□□□□ -1.38
RTR1P40084 PRR1YKL116C 1557 nt6.44□□□□□ -1.38
RTR1P40084 NOT3YIL038C 2511 nt6.44□□□□□ -1.38
RTR1P40084 MPA43YNL249C 1629 nt6.44□□□□□ -1.38
RTR1P40084 PRE7YBL041W 726 nt6.44□□□□□ -1.38
RTR1P40084 MRL1YPR079W 1146 nt6.44□□□□□ -1.38
RTR1P40084 JEM1YJL073W 1938 nt6.44□□□□□ -1.38
RTR1P40084 CTS1YLR286C 1689 nt6.43□□□□□ -1.38
RTR1P40084 BZZ1YHR114W 1902 nt6.43□□□□□ -1.38
RTR1P40084 NIT2YJL126W 924 nt6.43□□□□□ -1.38
RTR1P40084 MSH1YHR120W 2880 nt6.43□□□□□ -1.38
RTR1P40084 MKK2YPL140C 1521 nt6.42□□□□□ -1.38
RTR1P40084 SPT3YDR392W 1014 nt6.42□□□□□ -1.38
RTR1P40084 SHO1YER118C 1104 nt6.42□□□□□ -1.38
RTR1P40084 FZF1YGL254W 900 nt6.42□□□□□ -1.38
RTR1P40084 ISU2YOR226C 471 nt6.42□□□□□ -1.38
RTR1P40084 CIT3YPR001W 1461 nt6.41□□□□□ -1.38
RTR1P40084 HAP1YLR256W 4509 nt6.41□□□□□ -1.38
RTR1P40084 ATF1YOR377W 1578 nt6.41□□□□□ -1.38
RTR1P40084 RRP45YDR280W 918 nt6.41□□□□□ -1.38
RTR1P40084 tR(ACG)JtR(ACG)J 73 nt6.41□□□□□ -1.38
RTR1P40084 XPT1YJR133W 630 nt6.41□□□□□ -1.38
RTR1P40084 RPL3YOR063W 1164 nt6.41□□□□□ -1.38
RTR1P40084 MKK1YOR231W 1527 nt6.4□□□□□ -1.38
RTR1P40084 NSE5YML023C 1671 nt6.4□□□□□ -1.38
RTR1P40084 YBL070CYBL070C 321 nt6.4□□□□□ -1.38
RTR1P40084 SKN1YGR143W 2316 nt6.4□□□□□ -1.38
RTR1P40084 tX(XXX)DtX(XXX)D 100 nt6.39□□□□□ -1.39
RTR1P40084 SCW10YMR305C 1170 nt6.39□□□□□ -1.39
RTR1P40084 YFR006WYFR006W 1608 nt6.39□□□□□ -1.39
RTR1P40084 FAU1YER183C 636 nt6.38□□□□□ -1.39
RTR1P40084 YGR035W-AYGR035W-A 222 nt6.38□□□□□ -1.39
RTR1P40084 SPL2YHR136C 447 nt6.38□□□□□ -1.39
RTR1P40084 YBR226CYBR226C 411 nt6.38□□□□□ -1.39
RTR1P40084 SSY5YJL156C 2100 nt6.38□□□□□ -1.39
RTR1P40084 ABZ1YNR033W 2364 nt6.37□□□□□ -1.39
RTR1P40084 YIL067CYIL067C 2037 nt6.37□□□□□ -1.39
RTR1P40084 IWR1YDL115C 1062 nt6.37□□□□□ -1.39
RTR1P40084 RPB4YJL140W 666 nt6.37□□□□□ -1.39
RTR1P40084 YAL056C-AYAL056C-A 351 nt6.37□□□□□ -1.39
RTR1P40084 TOM5YPR133W-A 153 nt6.37□□□□□ -1.39
RTR1P40084 FUI1YBL042C 1920 nt6.37□□□□□ -1.39
RTR1P40084 SIA1YOR137C 1869 nt6.36□□□□□ -1.39
RTR1P40084 ZUO1YGR285C 1302 nt6.36□□□□□ -1.39
RTR1P40084 NGR1YBR212W 2019 nt6.36□□□□□ -1.39
RTR1P40084 PUS1YPL212C 1635 nt6.36□□□□□ -1.39
RTR1P40084 TUB2YFL037W 1374 nt6.35□□□□□ -1.39
RTR1P40084 CUE2YKL090W 1332 nt6.35□□□□□ -1.39
RTR1P40084 MF(ALPHA)2YGL089C 363 nt6.35□□□□□ -1.39
RTR1P40084 NSG1YHR133C 876 nt6.35□□□□□ -1.39
RTR1P40084 FUN19YAL034C 1242 nt6.35□□□□□ -1.39
RTR1P40084 SYG1YIL047C 2709 nt6.35□□□□□ -1.39
RTR1P40084 PDI1YCL043C 1569 nt6.35□□□□□ -1.39
RTR1P40084 ARB1YER036C 1833 nt6.34□□□□□ -1.39
RTR1P40084 PUS6YGR169C 1215 nt6.34□□□□□ -1.39
RTR1P40084 POP1YNL221C 2628 nt6.34□□□□□ -1.39
RTR1P40084 CWC21YDR482C 408 nt6.33□□□□□ -1.4
RTR1P40084 YNL019CYNL019C 855 nt6.33□□□□□ -1.4
RTR1P40084 YNL033WYNL033W 855 nt6.33□□□□□ -1.4
RTR1P40084 CAM1YPL048W 1248 nt6.33□□□□□ -1.4
RTR1P40084 ATE1YGL017W 1512 nt6.33□□□□□ -1.4
RTR1P40084 VTC2YFL004W 2487 nt6.33□□□□□ -1.4
RTR1P40084 RPT2YDL007W 1314 nt6.32□□□□□ -1.4
RTR1P40084 RML2YEL050C 1182 nt6.32□□□□□ -1.4
RTR1P40084 SPG4YMR107W 348 nt6.32□□□□□ -1.4
RTR1P40084 MRI1YPR118W 1236 nt6.32□□□□□ -1.4
RTR1P40084 HXT4YHR092C 1731 nt6.31□□□□□ -1.4
RTR1P40084 SLT2YHR030C 1455 nt6.31□□□□□ -1.4
RTR1P40084 CKB2YOR039W 777 nt6.31□□□□□ -1.4
RTR1P40084 MNN2YBR015C 1794 nt6.31□□□□□ -1.4
RTR1P40084 ASF2YDL197C 1578 nt6.31□□□□□ -1.4
RTR1P40084 HXT15YDL245C 1704 nt6.3□□□□□ -1.4
RTR1P40084 HXT16YJR158W 1704 nt6.3□□□□□ -1.4
RTR1P40084 YGR127WYGR127W 939 nt6.3□□□□□ -1.4
RTR1P40084 ETT1YOR051C 1239 nt6.3□□□□□ -1.4
RTR1P40084 BIT2YBR270C 1638 nt6.29□□□□□ -1.4
RTR1P40084 CDC16YKL022C 2523 nt6.29□□□□□ -1.4
RTR1P40084 THI5YFL058W 1023 nt6.29□□□□□ -1.4
RTR1P40084 GTO1YGR154C 1071 nt6.29□□□□□ -1.4
RTR1P40084 HSP150YJL159W 1242 nt6.29□□□□□ -1.4
RTR1P40084 APN1YKL114C 1104 nt6.29□□□□□ -1.4
RTR1P40084 THI12YNL332W 1023 nt6.29□□□□□ -1.4
RTR1P40084 YNR042WYNR042W 429 nt6.29□□□□□ -1.4
RTR1P40084 NMT1YLR195C 1368 nt6.29□□□□□ -1.4
RTR1P40084 JIP4YDR475C 2631 nt6.28□□□□□ -1.4
RTR1P40084 LCP5YER127W 1074 nt6.28□□□□□ -1.4
RTR1P40084 YJL171CYJL171C 1191 nt6.28□□□□□ -1.4
RTR1P40084 YAL044W-AYAL044W-A 333 nt6.28□□□□□ -1.4
RTR1P40084 BRE2YLR015W 1518 nt6.28□□□□□ -1.4
RTR1P40084 DUR1,2YBR208C 5508 nt6.27□□□□□ -1.41
RTR1P40084 SER33YIL074C 1410 nt6.27□□□□□ -1.41
RTR1P40084 YML057C-AYML057C-A 390 nt6.27□□□□□ -1.41
RTR1P40084 YMR010WYMR010W 1218 nt6.27□□□□□ -1.41
RTR1P40084 NRD1YNL251C 1728 nt6.27□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 18.7 ms