Protein–RNA interactions for Protein: P06839

RAD3, General transcription and DNA repair factor IIH helicase subunit XPD, yeastyeast

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAD3P06839 YGL185CYGL185C 1140 nt5.67□□□□□ -1.5
RAD3P06839 HXT3YDR345C 1704 nt5.67□□□□□ -1.5
RAD3P06839 STL1YDR536W 1710 nt5.67□□□□□ -1.5
RAD3P06839 APM2YHL019C 1818 nt5.67□□□□□ -1.5
RAD3P06839 VHS1YDR247W 1386 nt5.67□□□□□ -1.5
RAD3P06839 RAT1YOR048C 3021 nt5.66□□□□□ -1.5
RAD3P06839 UTP18YJL069C 1785 nt5.66□□□□□ -1.5
RAD3P06839 YLR194CYLR194C 765 nt5.66□□□□□ -1.5
RAD3P06839 YMR155WYMR155W 1644 nt5.66□□□□□ -1.5
RAD3P06839 ADE13YLR359W 1449 nt5.65□□□□□ -1.5
RAD3P06839 YMR027WYMR027W 1413 nt5.65□□□□□ -1.5
RAD3P06839 HFI1YPL254W 1467 nt5.65□□□□□ -1.5
RAD3P06839 HCR1YLR192C 798 nt5.65□□□□□ -1.5
RAD3P06839 SEC13YLR208W 894 nt5.65□□□□□ -1.5
RAD3P06839 YBL044WYBL044W 369 nt5.65□□□□□ -1.5
RAD3P06839 SOL1YNR034W 966 nt5.65□□□□□ -1.5
RAD3P06839 SRP101YDR292C 1866 nt5.64□□□□□ -1.51
RAD3P06839 YDL114WYDL114W 927 nt5.64□□□□□ -1.51
RAD3P06839 SOH1YGL127C 384 nt5.64□□□□□ -1.51
RAD3P06839 PGU1YJR153W 1086 nt5.64□□□□□ -1.51
RAD3P06839 DAL82YNL314W 768 nt5.64□□□□□ -1.51
RAD3P06839 CAR1YPL111W 1002 nt5.64□□□□□ -1.51
RAD3P06839 SED4YCR067C 3198 nt5.64□□□□□ -1.51
RAD3P06839 SYG1YIL047C 2709 nt5.64□□□□□ -1.51
RAD3P06839 YTA6YPL074W 2265 nt5.64□□□□□ -1.51
RAD3P06839 EEB1YPL095C 1371 nt5.64□□□□□ -1.51
RAD3P06839 VTH1YIL173W 4650 nt5.63□□□□□ -1.51
RAD3P06839 VTH2YJL222W 4650 nt5.63□□□□□ -1.51
RAD3P06839 DEF1YKL054C 2217 nt5.63□□□□□ -1.51
RAD3P06839 GIR2YDR152W 798 nt5.63□□□□□ -1.51
RAD3P06839 GLO2YDR272W 825 nt5.63□□□□□ -1.51
RAD3P06839 RML2YEL050C 1182 nt5.63□□□□□ -1.51
RAD3P06839 MTQ1YNL063W 945 nt5.63□□□□□ -1.51
RAD3P06839 RPO26YPR187W 468 nt5.63□□□□□ -1.51
RAD3P06839 ADE6YGR061C 4077 nt5.63□□□□□ -1.51
RAD3P06839 SHM1YBR263W 1473 nt5.63□□□□□ -1.51
RAD3P06839 TEA1YOR337W 2280 nt5.63□□□□□ -1.51
RAD3P06839 BUL1YMR275C 2931 nt5.62□□□□□ -1.51
RAD3P06839 LDB18YLL049W 540 nt5.62□□□□□ -1.51
RAD3P06839 RPS15YOL040C 429 nt5.62□□□□□ -1.51
RAD3P06839 CSG2YBR036C 1233 nt5.62□□□□□ -1.51
RAD3P06839 ORC5YNL261W 1440 nt5.62□□□□□ -1.51
RAD3P06839 KNH1YDL049C 807 nt5.61□□□□□ -1.51
RAD3P06839 YDR396WYDR396W 501 nt5.61□□□□□ -1.51
RAD3P06839 YGL072CYGL072C 360 nt5.61□□□□□ -1.51
RAD3P06839 SLT2YHR030C 1455 nt5.61□□□□□ -1.51
RAD3P06839 PRM10YJL108C 1152 nt5.61□□□□□ -1.51
RAD3P06839 MTW1YAL034W-A 870 nt5.61□□□□□ -1.51
RAD3P06839 SFK1YKL051W 1062 nt5.61□□□□□ -1.51
RAD3P06839 HLJ1YMR161W 675 nt5.61□□□□□ -1.51
RAD3P06839 snR10snR10 245 nt5.61□□□□□ -1.51
RAD3P06839 KTR3YBR205W 1215 nt5.61□□□□□ -1.51
RAD3P06839 PAL1YDR348C 1500 nt5.6□□□□□ -1.51
RAD3P06839 YER084WYER084W 387 nt5.6□□□□□ -1.51
RAD3P06839 ENV9YOR246C 993 nt5.6□□□□□ -1.51
RAD3P06839 HSP26YBR072W 645 nt5.6□□□□□ -1.51
RAD3P06839 YCL041CYCL041C 495 nt5.6□□□□□ -1.51
RAD3P06839 ASK10YGR097W 3441 nt5.59□□□□□ -1.51
RAD3P06839 KDX1YKL161C 1302 nt5.59□□□□□ -1.51
RAD3P06839 CDC43YGL155W 1131 nt5.59□□□□□ -1.51
RAD3P06839 NCS6YGL211W 1080 nt5.59□□□□□ -1.51
RAD3P06839 ECT1YGR007W 972 nt5.59□□□□□ -1.51
RAD3P06839 YGR182CYGR182C 354 nt5.59□□□□□ -1.51
RAD3P06839 YLR118CYLR118C 684 nt5.59□□□□□ -1.51
RAD3P06839 TFS1YLR178C 660 nt5.59□□□□□ -1.51
RAD3P06839 DAK1YML070W 1755 nt5.59□□□□□ -1.51
RAD3P06839 SEG2YKL105C 3399 nt5.58□□□□□ -1.52
RAD3P06839 RTT106YNL206C 1368 nt5.58□□□□□ -1.52
RAD3P06839 DDC1YPL194W 1839 nt5.58□□□□□ -1.52
RAD3P06839 HXT5YHR096C 1779 nt5.58□□□□□ -1.52
RAD3P06839 YDR401WYDR401W 564 nt5.58□□□□□ -1.52
RAD3P06839 ERG3YLR056W 1098 nt5.58□□□□□ -1.52
RAD3P06839 PDR16YNL231C 1056 nt5.58□□□□□ -1.52
RAD3P06839 VMS1YDR049W 1899 nt5.58□□□□□ -1.52
RAD3P06839 PRP46YPL151C 1356 nt5.57□□□□□ -1.52
RAD3P06839 ACF2YLR144C 2340 nt5.57□□□□□ -1.52
RAD3P06839 TDA7YNL176C 1911 nt5.57□□□□□ -1.52
RAD3P06839 SMF3YLR034C 1422 nt5.57□□□□□ -1.52
RAD3P06839 FOL1YNL256W 2475 nt5.56□□□□□ -1.52
RAD3P06839 YCR097W-AYCR097W-A 267 nt5.56□□□□□ -1.52
RAD3P06839 tX(XXX)DtX(XXX)D 100 nt5.56□□□□□ -1.52
RAD3P06839 MND2YIR025W 1107 nt5.56□□□□□ -1.52
RAD3P06839 YJR115WYJR115W 510 nt5.56□□□□□ -1.52
RAD3P06839 CLF1YLR117C 2064 nt5.55□□□□□ -1.52
RAD3P06839 STE7YDL159W 1548 nt5.55□□□□□ -1.52
RAD3P06839 PAP1YKR002W 1707 nt5.55□□□□□ -1.52
RAD3P06839 CAF4YKR036C 1932 nt5.55□□□□□ -1.52
RAD3P06839 MTQ2YDR140W 666 nt5.55□□□□□ -1.52
RAD3P06839 COG1YGL223C 1254 nt5.55□□□□□ -1.52
RAD3P06839 ZRT1YGL255W 1131 nt5.55□□□□□ -1.52
RAD3P06839 DCI1YOR180C 816 nt5.55□□□□□ -1.52
RAD3P06839 DUR1,2YBR208C 5508 nt5.55□□□□□ -1.52
RAD3P06839 MCH4YOL119C 1506 nt5.54□□□□□ -1.52
RAD3P06839 SIT1YEL065W 1887 nt5.54□□□□□ -1.52
RAD3P06839 ATG7YHR171W 1893 nt5.54□□□□□ -1.52
RAD3P06839 PEX19YDL065C 1029 nt5.54□□□□□ -1.52
RAD3P06839 GCS1YDL226C 1059 nt5.54□□□□□ -1.52
RAD3P06839 YHR212W-AYHR212W-A 204 nt5.54□□□□□ -1.52
RAD3P06839 YAR061WYAR061W 204 nt5.54□□□□□ -1.52
RAD3P06839 PIN2YOR104W 849 nt5.54□□□□□ -1.52
Retrieved 100 of 7,029 protein–RNA pairs in 19.9 ms