Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TNFP01375 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
TNFP01375 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TNFP01375 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.95■■□□□ 1.26
TNFP01375 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.95■■□□□ 1.26
TNFP01375 MIR6724-1-201ENST00000616420 92 ntBASIC22.95■■□□□ 1.26
TNFP01375 MIR6724-2-201ENST00000616483 92 ntBASIC22.95■■□□□ 1.26
TNFP01375 MIR6724-4-201ENST00000617390 92 ntBASIC22.95■■□□□ 1.26
TNFP01375 MIR6724-3-201ENST00000622482 92 ntBASIC22.95■■□□□ 1.26
TNFP01375 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.94■■□□□ 1.26
TNFP01375 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.94■■□□□ 1.26
TNFP01375 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TNFP01375 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
TNFP01375 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
TNFP01375 AC091060.1-201ENST00000623524 1766 ntBASIC22.94■■□□□ 1.26
TNFP01375 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
TNFP01375 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
TNFP01375 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.93■■□□□ 1.26
TNFP01375 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.93■■□□□ 1.26
TNFP01375 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
TNFP01375 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.93■■□□□ 1.26
TNFP01375 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TNFP01375 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.92■■□□□ 1.26
TNFP01375 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TNFP01375 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.92■■□□□ 1.26
TNFP01375 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TNFP01375 AC145676.1-201ENST00000514988 2004 ntBASIC22.91■■□□□ 1.26
TNFP01375 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.91■■□□□ 1.26
TNFP01375 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.91■■□□□ 1.26
TNFP01375 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.91■■□□□ 1.26
TNFP01375 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.91■■□□□ 1.26
TNFP01375 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.91■■□□□ 1.26
TNFP01375 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.91■■□□□ 1.26
TNFP01375 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.91■■□□□ 1.26
TNFP01375 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TNFP01375 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.9■■□□□ 1.26
TNFP01375 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.9■■□□□ 1.26
TNFP01375 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
TNFP01375 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.9■■□□□ 1.26
TNFP01375 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
TNFP01375 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TNFP01375 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.89■■□□□ 1.26
TNFP01375 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TNFP01375 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
TNFP01375 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
TNFP01375 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.89■■□□□ 1.25
TNFP01375 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TNFP01375 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
TNFP01375 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
TNFP01375 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
TNFP01375 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.88■■□□□ 1.25
TNFP01375 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.88■■□□□ 1.25
TNFP01375 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.88■■□□□ 1.25
TNFP01375 AL356740.2-201ENST00000601559 647 ntBASIC22.88■■□□□ 1.25
TNFP01375 AL117332.1-201ENST00000622628 974 ntBASIC22.88■■□□□ 1.25
TNFP01375 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
TNFP01375 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
TNFP01375 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.87■■□□□ 1.25
TNFP01375 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.87■■□□□ 1.25
TNFP01375 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.87■■□□□ 1.25
TNFP01375 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.87■■□□□ 1.25
TNFP01375 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
TNFP01375 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.86■■□□□ 1.25
TNFP01375 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TNFP01375 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
TNFP01375 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
TNFP01375 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TNFP01375 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TNFP01375 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.86■■□□□ 1.25
TNFP01375 SNX5-217ENST00000606557 1087 ntBASIC22.86■■□□□ 1.25
TNFP01375 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.86■■□□□ 1.25
TNFP01375 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
TNFP01375 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.85■■□□□ 1.25
TNFP01375 SLC6A10P-202ENST00000431994 2058 ntBASIC22.85■■□□□ 1.25
TNFP01375 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.85■■□□□ 1.25
TNFP01375 MIR3621-201ENST00000580529 85 ntBASIC22.85■■□□□ 1.25
TNFP01375 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TNFP01375 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
TNFP01375 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
TNFP01375 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
TNFP01375 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.84■■□□□ 1.25
TNFP01375 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
TNFP01375 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
TNFP01375 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
TNFP01375 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.84■■□□□ 1.25
TNFP01375 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.84■■□□□ 1.25
TNFP01375 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.84■■□□□ 1.25
TNFP01375 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TNFP01375 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
TNFP01375 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.83■■□□□ 1.25
TNFP01375 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
TNFP01375 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.83■■□□□ 1.25
TNFP01375 MIR6722-201ENST00000617286 78 ntBASIC22.83■■□□□ 1.25
TNFP01375 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.83■■□□□ 1.25
TNFP01375 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.83■■□□□ 1.24
TNFP01375 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TNFP01375 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
TNFP01375 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.24
TNFP01375 CEBPA-AS1-201ENST00000592982 2198 ntBASIC22.83■■□□□ 1.24
TNFP01375 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms