Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CHMP2AO43633 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CHMP2AO43633 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP2AO43633 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CHMP2AO43633 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.32■■□□□ 1.8
CHMP2AO43633 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP2AO43633 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.32■■□□□ 1.8
CHMP2AO43633 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHMP2AO43633 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.31■■□□□ 1.8
CHMP2AO43633 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP2AO43633 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CHMP2AO43633 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP2AO43633 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP2AO43633 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHMP2AO43633 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC26.31■■□□□ 1.8
CHMP2AO43633 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CHMP2AO43633 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.3■■□□□ 1.8
CHMP2AO43633 Z92544.1-202ENST00000571933 1220 ntBASIC26.3■■□□□ 1.8
CHMP2AO43633 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC26.3■■□□□ 1.8
CHMP2AO43633 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP2AO43633 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP2AO43633 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHMP2AO43633 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.29■■□□□ 1.8
CHMP2AO43633 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CHMP2AO43633 KRT125P-201ENST00000546827 989 ntBASIC26.29■■□□□ 1.8
CHMP2AO43633 AC137630.3-201ENST00000607245 391 ntBASIC26.29■■□□□ 1.8
CHMP2AO43633 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP2AO43633 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP2AO43633 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC26.28■■□□□ 1.8
CHMP2AO43633 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CHMP2AO43633 AC020928.2-201ENST00000588717 2197 ntBASIC26.28■■□□□ 1.8
CHMP2AO43633 AC022211.4-201ENST00000625094 2161 ntBASIC26.28■■□□□ 1.8
CHMP2AO43633 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP2AO43633 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHMP2AO43633 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.28■■□□□ 1.8
CHMP2AO43633 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHMP2AO43633 GUSBP5-201ENST00000418136 578 ntBASIC26.27■■□□□ 1.8
CHMP2AO43633 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC26.27■■□□□ 1.8
CHMP2AO43633 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC26.27■■□□□ 1.8
CHMP2AO43633 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.27■■□□□ 1.8
CHMP2AO43633 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
CHMP2AO43633 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP2AO43633 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP2AO43633 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP2AO43633 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.26■■□□□ 1.79
CHMP2AO43633 MIR4787-201ENST00000607364 84 ntBASIC26.26■■□□□ 1.79
CHMP2AO43633 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP2AO43633 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.26■■□□□ 1.79
CHMP2AO43633 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CHMP2AO43633 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP2AO43633 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP2AO43633 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP2AO43633 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP2AO43633 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.25■■□□□ 1.79
CHMP2AO43633 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.25■■□□□ 1.79
CHMP2AO43633 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CHMP2AO43633 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP2AO43633 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP2AO43633 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CHMP2AO43633 AF131216.4-201ENST00000638924 1588 ntBASIC26.24■■□□□ 1.79
CHMP2AO43633 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP2AO43633 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
CHMP2AO43633 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CHMP2AO43633 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
CHMP2AO43633 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.24■■□□□ 1.79
CHMP2AO43633 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC26.24■■□□□ 1.79
CHMP2AO43633 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.24■■□□□ 1.79
CHMP2AO43633 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC26.24■■□□□ 1.79
CHMP2AO43633 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP2AO43633 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP2AO43633 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP2AO43633 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP2AO43633 MIR6089-201ENST00000616698 64 ntBASIC26.23■■□□□ 1.79
CHMP2AO43633 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP2AO43633 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CHMP2AO43633 AC021242.3-201ENST00000607598 1377 ntBASIC26.22■■□□□ 1.79
CHMP2AO43633 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHMP2AO43633 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.22■■□□□ 1.79
CHMP2AO43633 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHMP2AO43633 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHMP2AO43633 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC26.22■■□□□ 1.79
CHMP2AO43633 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.22■■□□□ 1.79
CHMP2AO43633 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CHMP2AO43633 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP2AO43633 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP2AO43633 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
CHMP2AO43633 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.21■■□□□ 1.79
CHMP2AO43633 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.21■■□□□ 1.79
CHMP2AO43633 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP2AO43633 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CHMP2AO43633 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.21■■□□□ 1.79
CHMP2AO43633 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHMP2AO43633 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHMP2AO43633 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.2■■□□□ 1.78
CHMP2AO43633 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CHMP2AO43633 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP2AO43633 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CHMP2AO43633 TSPY9P-201ENST00000440215 945 ntBASIC26.19■■□□□ 1.78
CHMP2AO43633 TSPY11P-201ENST00000442607 1045 ntBASIC26.19■■□□□ 1.78
CHMP2AO43633 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms