Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC30.33■■■□□ 2.45
KCNQ3O43525 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.33■■■□□ 2.45
KCNQ3O43525 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC30.33■■■□□ 2.45
KCNQ3O43525 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
KCNQ3O43525 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC30.32■■■□□ 2.44
KCNQ3O43525 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC30.32■■■□□ 2.44
KCNQ3O43525 MIR3621-201ENST00000580529 85 ntBASIC30.32■■■□□ 2.44
KCNQ3O43525 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC30.32■■■□□ 2.44
KCNQ3O43525 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
KCNQ3O43525 MIR6724-1-201ENST00000616420 92 ntBASIC30.32■■■□□ 2.44
KCNQ3O43525 MIR6724-2-201ENST00000616483 92 ntBASIC30.32■■■□□ 2.44
KCNQ3O43525 MIR6724-4-201ENST00000617390 92 ntBASIC30.32■■■□□ 2.44
KCNQ3O43525 MIR6724-3-201ENST00000622482 92 ntBASIC30.32■■■□□ 2.44
KCNQ3O43525 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.31■■■□□ 2.44
KCNQ3O43525 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.31■■■□□ 2.44
KCNQ3O43525 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC30.31■■■□□ 2.44
KCNQ3O43525 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC30.3■■■□□ 2.44
KCNQ3O43525 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC30.29■■■□□ 2.44
KCNQ3O43525 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KCNQ3O43525 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.29■■■□□ 2.44
KCNQ3O43525 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
KCNQ3O43525 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC30.29■■■□□ 2.44
KCNQ3O43525 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.28■■■□□ 2.44
KCNQ3O43525 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
KCNQ3O43525 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
KCNQ3O43525 CLTA-206ENST00000466396 695 ntTSL 2 BASIC30.28■■■□□ 2.44
KCNQ3O43525 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.28■■■□□ 2.44
KCNQ3O43525 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.28■■■□□ 2.44
KCNQ3O43525 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
KCNQ3O43525 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC30.27■■■□□ 2.44
KCNQ3O43525 MIR4466-201ENST00000606121 54 ntBASIC30.27■■■□□ 2.44
KCNQ3O43525 SNX5-217ENST00000606557 1087 ntBASIC30.27■■■□□ 2.44
KCNQ3O43525 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.27■■■□□ 2.44
KCNQ3O43525 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
KCNQ3O43525 AC091060.1-201ENST00000623524 1766 ntBASIC30.27■■■□□ 2.44
KCNQ3O43525 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.44
KCNQ3O43525 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.26■■■□□ 2.44
KCNQ3O43525 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.44
KCNQ3O43525 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.26■■■□□ 2.43
KCNQ3O43525 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.26■■■□□ 2.43
KCNQ3O43525 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
KCNQ3O43525 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
KCNQ3O43525 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
KCNQ3O43525 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.25■■■□□ 2.43
KCNQ3O43525 SLC6A10P-202ENST00000431994 2058 ntBASIC30.25■■■□□ 2.43
KCNQ3O43525 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
KCNQ3O43525 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KCNQ3O43525 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
KCNQ3O43525 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
KCNQ3O43525 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
KCNQ3O43525 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC30.24■■■□□ 2.43
KCNQ3O43525 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
KCNQ3O43525 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC30.23■■■□□ 2.43
KCNQ3O43525 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
KCNQ3O43525 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC30.23■■■□□ 2.43
KCNQ3O43525 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
KCNQ3O43525 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.23■■■□□ 2.43
KCNQ3O43525 DUSP8P4-201ENST00000399538 1761 ntBASIC30.23■■■□□ 2.43
KCNQ3O43525 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KCNQ3O43525 AL136116.3-201ENST00000402907 1138 ntBASIC30.22■■■□□ 2.43
KCNQ3O43525 AL512631.2-201ENST00000604634 923 ntBASIC30.22■■■□□ 2.43
KCNQ3O43525 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KCNQ3O43525 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.22■■■□□ 2.43
KCNQ3O43525 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
KCNQ3O43525 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
KCNQ3O43525 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
KCNQ3O43525 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
KCNQ3O43525 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC30.21■■■□□ 2.43
KCNQ3O43525 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
KCNQ3O43525 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC30.21■■■□□ 2.43
KCNQ3O43525 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
KCNQ3O43525 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.21■■■□□ 2.43
KCNQ3O43525 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
KCNQ3O43525 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
KCNQ3O43525 LBH-205ENST00000407930 756 ntTSL 2 BASIC30.2■■■□□ 2.43
KCNQ3O43525 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC30.2■■■□□ 2.42
KCNQ3O43525 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
KCNQ3O43525 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
KCNQ3O43525 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ3O43525 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ3O43525 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ3O43525 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
KCNQ3O43525 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ3O43525 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC30.19■■■□□ 2.42
KCNQ3O43525 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
KCNQ3O43525 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
KCNQ3O43525 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
KCNQ3O43525 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
KCNQ3O43525 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
KCNQ3O43525 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC30.18■■■□□ 2.42
KCNQ3O43525 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
KCNQ3O43525 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
KCNQ3O43525 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC30.17■■■□□ 2.42
KCNQ3O43525 AL356740.2-201ENST00000601559 647 ntBASIC30.17■■■□□ 2.42
KCNQ3O43525 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
KCNQ3O43525 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
KCNQ3O43525 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30.17■■■□□ 2.42
KCNQ3O43525 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
KCNQ3O43525 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
KCNQ3O43525 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms