Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLIC1O00299 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC1O00299 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.98■■□□□ 1.11
CLIC1O00299 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.98■■□□□ 1.11
CLIC1O00299 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CLIC1O00299 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.98■■□□□ 1.11
CLIC1O00299 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLIC1O00299 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC1O00299 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.97■■□□□ 1.11
CLIC1O00299 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.97■■□□□ 1.11
CLIC1O00299 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC1O00299 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CLIC1O00299 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC1O00299 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC1O00299 GPX1-201ENST00000419349 1106 ntBASIC21.96■■□□□ 1.11
CLIC1O00299 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CLIC1O00299 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.96■■□□□ 1.11
CLIC1O00299 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.96■■□□□ 1.11
CLIC1O00299 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CLIC1O00299 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CLIC1O00299 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 AC133561.1-201ENST00000568600 2415 ntBASIC21.95■■□□□ 1.1
CLIC1O00299 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CLIC1O00299 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.95■■□□□ 1.1
CLIC1O00299 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CLIC1O00299 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLIC1O00299 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.94■■□□□ 1.1
CLIC1O00299 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CLIC1O00299 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLIC1O00299 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLIC1O00299 MIR4449-201ENST00000578365 66 ntBASIC21.94■■□□□ 1.1
CLIC1O00299 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLIC1O00299 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.94■■□□□ 1.1
CLIC1O00299 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
CLIC1O00299 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLIC1O00299 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.94■■□□□ 1.1
CLIC1O00299 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CLIC1O00299 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CLIC1O00299 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLIC1O00299 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC21.93■■□□□ 1.1
CLIC1O00299 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CLIC1O00299 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLIC1O00299 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLIC1O00299 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CLIC1O00299 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.93■■□□□ 1.1
CLIC1O00299 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLIC1O00299 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLIC1O00299 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CLIC1O00299 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.92■■□□□ 1.1
CLIC1O00299 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CLIC1O00299 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CLIC1O00299 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CLIC1O00299 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLIC1O00299 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.91■■□□□ 1.1
CLIC1O00299 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CLIC1O00299 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLIC1O00299 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CLIC1O00299 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLIC1O00299 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLIC1O00299 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CLIC1O00299 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.91■■□□□ 1.1
CLIC1O00299 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CLIC1O00299 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.91■■□□□ 1.1
CLIC1O00299 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.91■■□□□ 1.1
CLIC1O00299 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CLIC1O00299 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC1O00299 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC1O00299 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC1O00299 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC1O00299 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC21.9■■□□□ 1.1
CLIC1O00299 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC1O00299 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
CLIC1O00299 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CLIC1O00299 DUSP8P5-201ENST00000422884 1815 ntBASIC21.9■■□□□ 1.1
CLIC1O00299 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLIC1O00299 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLIC1O00299 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLIC1O00299 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLIC1O00299 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
CLIC1O00299 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
CLIC1O00299 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CLIC1O00299 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.89■■□□□ 1.09
CLIC1O00299 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLIC1O00299 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLIC1O00299 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CLIC1O00299 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC1O00299 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.88■■□□□ 1.09
CLIC1O00299 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
CLIC1O00299 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CLIC1O00299 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.88■■□□□ 1.09
CLIC1O00299 AC009831.1-201ENST00000580420 1582 ntBASIC21.88■■□□□ 1.09
CLIC1O00299 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms