Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAV26-1A0A087WT03 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV26-1A0A087WT03 AC097639.1-201ENST00000565519 1891 ntBASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV26-1A0A087WT03 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV26-1A0A087WT03 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV26-1A0A087WT03 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV26-1A0A087WT03 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV26-1A0A087WT03 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV26-1A0A087WT03 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV26-1A0A087WT03 AC010980.1-201ENST00000587192 1142 ntBASIC16.7■□□□□ 0.26
TRAV26-1A0A087WT03 AC074183.2-201ENST00000623112 922 ntBASIC16.7■□□□□ 0.26
TRAV26-1A0A087WT03 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV26-1A0A087WT03 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV26-1A0A087WT03 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV26-1A0A087WT03 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV26-1A0A087WT03 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV26-1A0A087WT03 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV26-1A0A087WT03 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV26-1A0A087WT03 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TRAV26-1A0A087WT03 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV26-1A0A087WT03 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV26-1A0A087WT03 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 AC012676.1-201ENST00000574705 1949 ntBASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 BEX3-202ENST00000372634 753 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 LONRF2P2-201ENST00000439212 571 ntBASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV26-1A0A087WT03 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV26-1A0A087WT03 AL121603.2-201ENST00000557373 2117 ntBASIC16.64■□□□□ 0.25
TRAV26-1A0A087WT03 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV26-1A0A087WT03 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.64■□□□□ 0.25
TRAV26-1A0A087WT03 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV26-1A0A087WT03 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms