Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 AC087641.1-201ENST00000557561 1021 ntBASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 AC027307.2-201ENST00000591252 911 ntBASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 CYP2A7P1-201ENST00000595391 815 ntBASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DDX49Q9Y6V7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 AC138035.3-201ENST00000622706 2791 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 CNN2P2-201ENST00000443536 909 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 CNN2P3-201ENST00000450201 906 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 KLF2P3-201ENST00000451977 1087 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 AC125807.1-201ENST00000483097 614 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 AL512356.2-201ENST00000546955 174 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 AP000842.3-202ENST00000569238 1080 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 AC091167.2-201ENST00000579581 588 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 AC138761.1-201ENST00000584393 385 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 AL136317.3-201ENST00000618497 906 ntBASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DDX49Q9Y6V7 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DDX49Q9Y6V7 TMBIM7P-203ENST00000641617 1718 ntBASIC19.02■□□□□ 0.63
DDX49Q9Y6V7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC19.02■□□□□ 0.63
DDX49Q9Y6V7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DDX49Q9Y6V7 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DDX49Q9Y6V7 AC106881.1-201ENST00000605849 3329 ntBASIC19.02■□□□□ 0.63
DDX49Q9Y6V7 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
DDX49Q9Y6V7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms