Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 AC061975.2-201ENST00000581722 295 ntBASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 AC026979.3-201ENST00000607315 403 ntBASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR1DQ9Y2S0 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 FOXO1B-201ENST00000504678 1527 ntBASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 SLC25A39P2-201ENST00000537614 270 ntBASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 AC005829.1-201ENST00000570002 483 ntBASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 DBET-201ENST00000630918 3363 ntBASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 ELL2P1-201ENST00000413990 1906 ntBASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
POLR1DQ9Y2S0 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 AC092850.2-201ENST00000623821 2697 ntBASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 KRT18P32-201ENST00000424695 1287 ntBASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 MIR3687-2-201ENST00000577708 61 ntBASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 MIR3687-1-201ENST00000614492 61 ntBASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
POLR1DQ9Y2S0 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms