Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AC018892.3-201ENST00000623986 2499 ntBASIC6.22□□□□□ -1.41
MACF1Q9UPN3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AC008494.1-201ENST00000497612 796 ntBASIC6.22□□□□□ -1.41
MACF1Q9UPN3 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 BMF-206ENST00000558774 671 ntTSL 3 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 HERC2P11-201ENST00000562845 725 ntBASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AC091304.3-201ENST00000566500 716 ntBASIC6.22□□□□□ -1.41
MACF1Q9UPN3 PHBP15-201ENST00000574228 665 ntBASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AL355312.1-201ENST00000407115 2176 ntBASIC6.22□□□□□ -1.41
MACF1Q9UPN3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AC069061.4-201ENST00000581294 1347 ntBASIC6.22□□□□□ -1.41
MACF1Q9UPN3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 ISL1-203ENST00000511384 981 ntTSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 KNOP1P1-201ENST00000542108 989 ntBASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 HLA-J-204ENST00000495278 958 ntBASIC6.22□□□□□ -1.41
MACF1Q9UPN3 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC6.22□□□□□ -1.41
MACF1Q9UPN3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 CLUHP2-201ENST00000426660 1303 ntBASIC6.21□□□□□ -1.41
MACF1Q9UPN3 PPP1R2P10-201ENST00000393023 595 ntBASIC6.21□□□□□ -1.41
MACF1Q9UPN3 AL080243.1-201ENST00000423293 1060 ntBASIC6.21□□□□□ -1.41
MACF1Q9UPN3 AP000281.2-201ENST00000427911 384 ntTSL 3 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 PEBP1P3-201ENST00000455475 548 ntBASIC6.21□□□□□ -1.41
MACF1Q9UPN3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 AL590491.2-202ENST00000611126 418 ntTSL 5 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 UBE2L5P-202ENST00000635918 1513 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
MACF1Q9UPN3 WDR54-202ENST00000409791 854 ntTSL 3 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 CA5BP1-205ENST00000435806 1064 ntBASIC6.21□□□□□ -1.42
MACF1Q9UPN3 RBM14-205ENST00000443702 732 ntTSL 3 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AL590556.2-202ENST00000636906 844 ntBASIC6.21□□□□□ -1.42
MACF1Q9UPN3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 KRT8P31-201ENST00000504812 1408 ntBASIC6.21□□□□□ -1.42
MACF1Q9UPN3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 LINC01664-202ENST00000441544 1175 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms