Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AC145285.3-201ENST00000564603 959 ntBASIC14.13□□□□□ -0.15
COPS3Q9UNS2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AL513190.1-201ENST00000621254 727 ntBASIC14.13□□□□□ -0.15
COPS3Q9UNS2 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
COPS3Q9UNS2 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 AC074386.1-202ENST00000463561 864 ntBASIC14.12□□□□□ -0.15
COPS3Q9UNS2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 PDPK2P-202ENST00000562415 1191 ntBASIC14.12□□□□□ -0.15
COPS3Q9UNS2 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 SPTSSB-204ENST00000617024 1292 ntBASIC14.12□□□□□ -0.15
COPS3Q9UNS2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 SBF1P1-201ENST00000444527 5631 ntBASIC14.12□□□□□ -0.15
COPS3Q9UNS2 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.12□□□□□ -0.15
COPS3Q9UNS2 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 KRT8P44-201ENST00000441609 1350 ntBASIC14.11□□□□□ -0.15
COPS3Q9UNS2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 AC002056.1-201ENST00000395613 760 ntBASIC14.11□□□□□ -0.15
COPS3Q9UNS2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.11□□□□□ -0.15
COPS3Q9UNS2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms