Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 AL355306.1-201ENST00000415580 579 ntBASIC18.13■□□□□ 0.49
USP25Q9UHP3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 AGAP7P-201ENST00000582299 2062 ntBASIC18.13■□□□□ 0.49
USP25Q9UHP3 AGAP14-201ENST00000624701 2060 ntBASIC18.13■□□□□ 0.49
USP25Q9UHP3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 FOXO1B-201ENST00000504678 1527 ntBASIC18.13■□□□□ 0.49
USP25Q9UHP3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
USP25Q9UHP3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
USP25Q9UHP3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP25Q9UHP3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP25Q9UHP3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP25Q9UHP3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
USP25Q9UHP3 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 TFAMP1-201ENST00000412727 736 ntBASIC18.12■□□□□ 0.49
USP25Q9UHP3 AL671277.1-201ENST00000429656 993 ntBASIC18.12■□□□□ 0.49
USP25Q9UHP3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 AC243562.2-201ENST00000561247 970 ntBASIC18.12■□□□□ 0.49
USP25Q9UHP3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 AC120114.3-201ENST00000611923 658 ntBASIC18.12■□□□□ 0.49
USP25Q9UHP3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 AC013726.1-201ENST00000563747 2285 ntBASIC18.12■□□□□ 0.49
USP25Q9UHP3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP25Q9UHP3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP25Q9UHP3 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP25Q9UHP3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP25Q9UHP3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
USP25Q9UHP3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.12■□□□□ 0.49
USP25Q9UHP3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
USP25Q9UHP3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.11■□□□□ 0.49
USP25Q9UHP3 RN7SL589P-201ENST00000481268 310 ntBASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms