Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TREHP1-201ENST00000531328 465 ntBASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 MIR6893-201ENST00000613458 69 ntBASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 RN7SKP109-201ENST00000410592 316 ntBASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 AC092580.1-201ENST00000433998 658 ntBASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC24.1■■□□□ 1.45
RIMBP3Q9UFD9 HLA-DQB1-202ENST00000399079 1501 ntBASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 PHB-210ENST00000511832 1509 ntTSL 2 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 AC018892.3-201ENST00000623986 2499 ntBASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 AC006122.1-201ENST00000493323 440 ntBASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 MIR3188-201ENST00000583494 85 ntBASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RIMBP3Q9UFD9 CTBP2P8-201ENST00000422584 1330 ntBASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 AC114947.1-202ENST00000514136 344 ntBASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 CTB-178M22.2-201ENST00000519795 503 ntTSL 4 BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 MIR6746-201ENST00000620971 63 ntBASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC24.08■■□□□ 1.45
RIMBP3Q9UFD9 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
RIMBP3Q9UFD9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RIMBP3Q9UFD9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms