Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 PRORSD1P-202ENST00000563365 2154 ntBASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 AP006547.1-201ENST00000563435 692 ntBASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRMT13Q9NUP7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 AC011477.6-201ENST00000604980 1927 ntBASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 RNU1-114P-201ENST00000365297 166 ntBASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 AKR7A2P1-201ENST00000460134 915 ntBASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 EEF1DP1-201ENST00000585891 896 ntBASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 AC244452.3-201ENST00000636814 210 ntBASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRMT13Q9NUP7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 MIR648-201ENST00000385046 94 ntBASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 AC092506.1-202ENST00000401022 528 ntBASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 KLF2P2-201ENST00000416807 1039 ntBASIC17.12■□□□□ 0.33
TRMT13Q9NUP7 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms