Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 AC126755.1-201ENST00000525846 6405 ntBASIC16.32■□□□□ 0.2
HPS4Q9NQG7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HPS4Q9NQG7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 ALOX12P2-203ENST00000570921 1945 ntBASIC16.31■□□□□ 0.2
HPS4Q9NQG7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 AL162726.2-201ENST00000438986 1017 ntBASIC16.31■□□□□ 0.2
HPS4Q9NQG7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 SLC25A47P1-201ENST00000531577 414 ntBASIC16.31■□□□□ 0.2
HPS4Q9NQG7 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 MIR5189-201ENST00000577370 114 ntBASIC16.31■□□□□ 0.2
HPS4Q9NQG7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.31■□□□□ 0.2
HPS4Q9NQG7 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 BOLA2P3-201ENST00000404566 256 ntBASIC16.3■□□□□ 0.2
HPS4Q9NQG7 TOMM22P5-201ENST00000416399 439 ntBASIC16.3■□□□□ 0.2
HPS4Q9NQG7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 BNIP3P42-201ENST00000454982 569 ntBASIC16.3■□□□□ 0.2
HPS4Q9NQG7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 AC104989.1-201ENST00000519711 778 ntBASIC16.3■□□□□ 0.2
HPS4Q9NQG7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 BNIP3P29-201ENST00000598302 571 ntBASIC16.3■□□□□ 0.2
HPS4Q9NQG7 AC011447.5-201ENST00000616168 564 ntBASIC16.3■□□□□ 0.2
HPS4Q9NQG7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HPS4Q9NQG7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms