Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
HMG20AQ9NP66 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 AP002414.1-201ENST00000391405 1147 ntBASIC14.42□□□□□ -0.1
HMG20AQ9NP66 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 HCG4P8-203ENST00000443049 980 ntBASIC14.42□□□□□ -0.1
HMG20AQ9NP66 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 AL353135.1-201ENST00000606729 504 ntBASIC14.42□□□□□ -0.1
HMG20AQ9NP66 AL732292.2-201ENST00000609649 430 ntBASIC14.42□□□□□ -0.1
HMG20AQ9NP66 AL121772.3-201ENST00000610840 674 ntBASIC14.42□□□□□ -0.1
HMG20AQ9NP66 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 AL139288.1-201ENST00000623748 933 ntBASIC14.42□□□□□ -0.1
HMG20AQ9NP66 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 AL022326.1-202ENST00000641533 845 ntBASIC14.42□□□□□ -0.1
HMG20AQ9NP66 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.42□□□□□ -0.1
HMG20AQ9NP66 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HMG20AQ9NP66 CICP8-201ENST00000455800 2813 ntBASIC14.42□□□□□ -0.1
HMG20AQ9NP66 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 AL590787.1-201ENST00000568856 1315 ntBASIC14.41□□□□□ -0.1
HMG20AQ9NP66 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 NCF1C-201ENST00000438382 1427 ntBASIC14.41□□□□□ -0.1
HMG20AQ9NP66 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.41□□□□□ -0.1
HMG20AQ9NP66 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.41□□□□□ -0.1
HMG20AQ9NP66 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 NKAPP1-205ENST00000585790 367 ntBASIC14.41□□□□□ -0.1
HMG20AQ9NP66 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 AC010654.1-201ENST00000615722 808 ntBASIC14.41□□□□□ -0.1
HMG20AQ9NP66 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 GPAA1P2-202ENST00000606848 1787 ntBASIC14.41□□□□□ -0.1
HMG20AQ9NP66 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms