Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 AC013268.4-201ENST00000637413 2228 ntBASIC13.84□□□□□ -0.19
ELL3Q9HB65 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 AC008677.1-201ENST00000519230 1561 ntBASIC13.84□□□□□ -0.19
ELL3Q9HB65 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 AC109635.5-201ENST00000533593 962 ntBASIC13.84□□□□□ -0.19
ELL3Q9HB65 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 AC131212.3-201ENST00000624087 4219 ntBASIC13.84□□□□□ -0.19
ELL3Q9HB65 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 AC022532.1-201ENST00000624563 1728 ntBASIC13.84□□□□□ -0.19
ELL3Q9HB65 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ELL3Q9HB65 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ELL3Q9HB65 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.83□□□□□ -0.19
ELL3Q9HB65 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ELL3Q9HB65 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ELL3Q9HB65 PPT1-215ENST00000641471 2368 ntBASIC13.83□□□□□ -0.19
ELL3Q9HB65 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ELL3Q9HB65 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
ELL3Q9HB65 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
ELL3Q9HB65 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ELL3Q9HB65 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.83□□□□□ -0.19
ELL3Q9HB65 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 AC136621.1-201ENST00000624017 2304 ntBASIC13.83□□□□□ -0.2
ELL3Q9HB65 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 FAM58CP-201ENST00000435741 640 ntBASIC13.83□□□□□ -0.2
ELL3Q9HB65 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 AC073439.1-201ENST00000624121 1774 ntBASIC13.83□□□□□ -0.2
ELL3Q9HB65 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.83□□□□□ -0.2
ELL3Q9HB65 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ELL3Q9HB65 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms