Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 AC074386.1-202ENST00000463561 864 ntBASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 AC027796.2-201ENST00000575326 344 ntBASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.8□□□□□ -0.04
AMBRA1Q9C0C7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 RPSAP43-201ENST00000402237 625 ntBASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 AL161645.1-201ENST00000622716 1255 ntBASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.79□□□□□ -0.04
AMBRA1Q9C0C7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 PKD1P5-201ENST00000532415 10291 ntBASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 AL691432.1-201ENST00000596308 1422 ntBASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
AMBRA1Q9C0C7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms