Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 IFNA14-201ENST00000380222 990 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM204CP-201ENST00000424489 642 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 HCG4P8-203ENST00000443049 980 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 FAM197Y8-203ENST00000450145 560 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AC137549.1-201ENST00000514243 533 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AC112191.1-201ENST00000523689 701 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 BMF-207ENST00000559701 630 ntTSL 3 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 ADAL-204ENST00000562188 1228 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AC239868.3-201ENST00000577853 1234 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AC061975.2-201ENST00000581722 295 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AL445228.2-201ENST00000605589 952 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AC016597.2-201ENST00000613256 341 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AC104581.4-201ENST00000623126 3052 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 AL035563.1-201ENST00000609087 1539 ntBASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
KRTAP3-1Q9BYR8 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 GRK6P1-201ENST00000400595 1711 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PMS2P7-201ENST00000506558 1336 ntBASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC8.06□□□□□ -1.12
KRTAP3-1Q9BYR8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms