Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AL359258.3-201ENST00000622910 2331 ntBASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 AL009178.2-201ENST00000597278 2719 ntBASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
RSPO3Q9BXY4 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 AC026748.1-201ENST00000624349 3251 ntBASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 BX842568.4-201ENST00000421222 227 ntBASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 AL512356.2-201ENST00000546955 174 ntBASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
RSPO3Q9BXY4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 RPL13P2-201ENST00000440687 659 ntBASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 LINC01115-203ENST00000606068 577 ntBASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 AL035456.1-201ENST00000456064 1369 ntBASIC14.41□□□□□ -0.1
RSPO3Q9BXY4 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms