Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NPAS2Q99743 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
NPAS2Q99743 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
NPAS2Q99743 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS2Q99743 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.5■□□□□ 0.07
NPAS2Q99743 TFAMP1-201ENST00000412727 736 ntBASIC15.5■□□□□ 0.07
NPAS2Q99743 AC092474.2-201ENST00000424288 719 ntBASIC15.5■□□□□ 0.07
NPAS2Q99743 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.5■□□□□ 0.07
NPAS2Q99743 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.5■□□□□ 0.07
NPAS2Q99743 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.5■□□□□ 0.07
NPAS2Q99743 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.5■□□□□ 0.07
NPAS2Q99743 AC109635.5-201ENST00000533593 962 ntBASIC15.5■□□□□ 0.07
NPAS2Q99743 AL135744.1-201ENST00000565098 629 ntBASIC15.5■□□□□ 0.07
NPAS2Q99743 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.5■□□□□ 0.07
NPAS2Q99743 AL355385.1-201ENST00000606123 409 ntBASIC15.5■□□□□ 0.07
NPAS2Q99743 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS2Q99743 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS2Q99743 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.5■□□□□ 0.07
NPAS2Q99743 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
NPAS2Q99743 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 C18orf15-201ENST00000623680 2534 ntBASIC15.5■□□□□ 0.07
NPAS2Q99743 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 CICP23-201ENST00000605013 2741 ntBASIC15.5■□□□□ 0.07
NPAS2Q99743 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
NPAS2Q99743 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
NPAS2Q99743 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS2Q99743 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS2Q99743 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
NPAS2Q99743 AC011477.6-201ENST00000604980 1927 ntBASIC15.49■□□□□ 0.07
NPAS2Q99743 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
NPAS2Q99743 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS2Q99743 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS2Q99743 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS2Q99743 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 TSEN15P1-201ENST00000423257 515 ntBASIC15.49■□□□□ 0.07
NPAS2Q99743 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS2Q99743 HMGN1P19-201ENST00000436976 333 ntBASIC15.49■□□□□ 0.07
NPAS2Q99743 AC079140.1-201ENST00000508039 487 ntBASIC15.49■□□□□ 0.07
NPAS2Q99743 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS2Q99743 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS2Q99743 RFPL4AP1-201ENST00000530883 850 ntBASIC15.49■□□□□ 0.07
NPAS2Q99743 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS2Q99743 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.49■□□□□ 0.07
NPAS2Q99743 RARRES2P8-201ENST00000566335 367 ntBASIC15.49■□□□□ 0.07
NPAS2Q99743 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 AL031055.1-201ENST00000606362 631 ntBASIC15.49■□□□□ 0.07
NPAS2Q99743 AC093028.1-201ENST00000622998 982 ntBASIC15.49■□□□□ 0.07
NPAS2Q99743 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS2Q99743 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS2Q99743 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS2Q99743 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.49■□□□□ 0.07
NPAS2Q99743 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
NPAS2Q99743 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
NPAS2Q99743 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.49■□□□□ 0.07
NPAS2Q99743 AC009090.5-201ENST00000624886 2285 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms