Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.04■□□□□ -0
CGREF1Q99674 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.04■□□□□ -0
CGREF1Q99674 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CGREF1Q99674 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.04■□□□□ -0
CGREF1Q99674 AL031008.1-201ENST00000619963 541 ntBASIC15.04■□□□□ -0
CGREF1Q99674 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CGREF1Q99674 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CGREF1Q99674 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
CGREF1Q99674 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CGREF1Q99674 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.04■□□□□ -0
CGREF1Q99674 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.04■□□□□ -0
CGREF1Q99674 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.04■□□□□ -0
CGREF1Q99674 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CGREF1Q99674 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.04■□□□□ -0
CGREF1Q99674 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
CGREF1Q99674 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CGREF1Q99674 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC15.04■□□□□ -0
CGREF1Q99674 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CGREF1Q99674 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CGREF1Q99674 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.04■□□□□ -0
CGREF1Q99674 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.04■□□□□ -0
CGREF1Q99674 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.03■□□□□ -0
CGREF1Q99674 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
CGREF1Q99674 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.03■□□□□ -0
CGREF1Q99674 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 FOXO1B-201ENST00000504678 1527 ntBASIC15.03■□□□□ -0
CGREF1Q99674 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.03■□□□□ -0
CGREF1Q99674 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 AL161772.1-201ENST00000610494 4412 ntBASIC15.03■□□□□ -0
CGREF1Q99674 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.03■□□□□ -0
CGREF1Q99674 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 RPS8P6-201ENST00000426177 609 ntBASIC15.03■□□□□ -0
CGREF1Q99674 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.03■□□□□ -0
CGREF1Q99674 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.03■□□□□ -0
CGREF1Q99674 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.03■□□□□ -0
CGREF1Q99674 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.03■□□□□ -0
CGREF1Q99674 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.03■□□□□ -0
CGREF1Q99674 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.03■□□□□ -0
CGREF1Q99674 AC018845.2-201ENST00000568326 409 ntBASIC15.03■□□□□ -0
CGREF1Q99674 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.03■□□□□ -0
CGREF1Q99674 AL450472.2-201ENST00000603663 1156 ntBASIC15.03■□□□□ -0
CGREF1Q99674 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.03■□□□□ -0
CGREF1Q99674 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.03■□□□□ -0
CGREF1Q99674 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.03■□□□□ -0
CGREF1Q99674 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 AL390755.1-201ENST00000623716 2027 ntBASIC15.03■□□□□ -0
CGREF1Q99674 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.03■□□□□ -0
CGREF1Q99674 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.03■□□□□ -0
CGREF1Q99674 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.03■□□□□ -0
CGREF1Q99674 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CGREF1Q99674 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.02■□□□□ -0
CGREF1Q99674 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.02■□□□□ -0
CGREF1Q99674 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
CGREF1Q99674 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.02■□□□□ -0
CGREF1Q99674 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CGREF1Q99674 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CGREF1Q99674 AC002056.1-201ENST00000395613 760 ntBASIC15.02■□□□□ -0
CGREF1Q99674 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
CGREF1Q99674 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
CGREF1Q99674 RNA5SP419-201ENST00000515908 135 ntBASIC15.02■□□□□ -0
CGREF1Q99674 AC105233.2-201ENST00000523697 349 ntBASIC15.02■□□□□ -0
CGREF1Q99674 AF228730.5-201ENST00000530288 346 ntBASIC15.02■□□□□ -0
CGREF1Q99674 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CGREF1Q99674 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms