Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15□□□□□ -0.01
BBS4Q96RK4 MIR4453-201ENST00000584019 89 ntBASIC15□□□□□ -0.01
BBS4Q96RK4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
BBS4Q96RK4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15□□□□□ -0.01
BBS4Q96RK4 AC007967.4-201ENST00000614700 386 ntBASIC15□□□□□ -0.01
BBS4Q96RK4 AP001059.3-201ENST00000619053 235 ntBASIC15□□□□□ -0.01
BBS4Q96RK4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
BBS4Q96RK4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
BBS4Q96RK4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15□□□□□ -0.01
BBS4Q96RK4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
BBS4Q96RK4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
BBS4Q96RK4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
BBS4Q96RK4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
BBS4Q96RK4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15□□□□□ -0.01
BBS4Q96RK4 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15□□□□□ -0.01
BBS4Q96RK4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
BBS4Q96RK4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15□□□□□ -0.01
BBS4Q96RK4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15□□□□□ -0.01
BBS4Q96RK4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 AC087481.3-201ENST00000602886 1894 ntBASIC14.99□□□□□ -0.01
BBS4Q96RK4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 EEF1DP4-201ENST00000446006 880 ntBASIC14.99□□□□□ -0.01
BBS4Q96RK4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 MIR4313-201ENST00000580760 101 ntBASIC14.99□□□□□ -0.01
BBS4Q96RK4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 RN7SL828P-201ENST00000607615 303 ntBASIC14.99□□□□□ -0.01
BBS4Q96RK4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.99□□□□□ -0.01
BBS4Q96RK4 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
BBS4Q96RK4 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
BBS4Q96RK4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BBS4Q96RK4 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms