Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 AC041040.2-201ENST00000622926 2899 ntBASIC14.45□□□□□ -0.1
SNX18Q96RF0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 MCCD1P2-201ENST00000423228 335 ntBASIC14.45□□□□□ -0.1
SNX18Q96RF0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 AC074386.1-202ENST00000463561 864 ntBASIC14.45□□□□□ -0.1
SNX18Q96RF0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 AC005829.1-201ENST00000570002 483 ntBASIC14.45□□□□□ -0.1
SNX18Q96RF0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 AL596442.2-201ENST00000610240 980 ntBASIC14.45□□□□□ -0.1
SNX18Q96RF0 AL513190.1-201ENST00000621254 727 ntBASIC14.45□□□□□ -0.1
SNX18Q96RF0 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 AC009090.5-201ENST00000624886 2285 ntBASIC14.45□□□□□ -0.1
SNX18Q96RF0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SNX18Q96RF0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
SNX18Q96RF0 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 DNAJB3-202ENST00000449667 1266 ntBASIC14.44□□□□□ -0.1
SNX18Q96RF0 ALG1L5P-201ENST00000482043 771 ntBASIC14.44□□□□□ -0.1
SNX18Q96RF0 AC112191.1-201ENST00000523689 701 ntBASIC14.44□□□□□ -0.1
SNX18Q96RF0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
SNX18Q96RF0 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SNX18Q96RF0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SNX18Q96RF0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.43□□□□□ -0.1
SNX18Q96RF0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms