Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 AL133267.1-201ENST00000398220 340 ntBASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CSMD1Q96PZ7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 DPM3-202ENST00000368399 517 ntBASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AC103988.2-201ENST00000561804 725 ntBASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 BNIP3P13-201ENST00000599968 566 ntBASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AC148477.4-201ENST00000613430 1793 ntBASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 MIR4754-201ENST00000582477 89 ntBASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 ETV2-207ENST00000619399 994 ntTSL 5 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AC100757.4-201ENST00000626934 759 ntBASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 IGHV3-37-201ENST00000518544 340 ntBASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.17□□□□□ -0.3
CSMD1Q96PZ7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 AC079178.1-201ENST00000420915 656 ntBASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 BX539320.1-201ENST00000623759 877 ntBASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 AL805961.1-203ENST00000641078 1258 ntBASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CSMD1Q96PZ7 AL121723.1-201ENST00000445194 1519 ntBASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms