Protein–RNA interactions for Protein: Q96LM1

LINC00615, Putative uncharacterized protein encoded by LINC00615, humanhuman

Predicted RBP Predictions only

Length 132 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00615Q96LM1 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LINC00615Q96LM1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 SSR4P1-203ENST00000599569 2260 ntBASIC15.24■□□□□ 0.03
LINC00615Q96LM1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 INTS4P2-202ENST00000614726 2019 ntBASIC15.24■□□□□ 0.03
LINC00615Q96LM1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 AC134915.1-201ENST00000426461 574 ntBASIC15.24■□□□□ 0.03
LINC00615Q96LM1 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LINC00615Q96LM1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.24■□□□□ 0.03
LINC00615Q96LM1 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 AL139384.1-201ENST00000612143 3047 ntBASIC15.23■□□□□ 0.03
LINC00615Q96LM1 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 VDAC1P7-201ENST00000462417 847 ntBASIC15.23■□□□□ 0.03
LINC00615Q96LM1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 AC124283.3-201ENST00000570869 594 ntBASIC15.23■□□□□ 0.03
LINC00615Q96LM1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 AC093813.1-201ENST00000605066 256 ntBASIC15.23■□□□□ 0.03
LINC00615Q96LM1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.23■□□□□ 0.03
LINC00615Q96LM1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
LINC00615Q96LM1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00615Q96LM1 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00615Q96LM1 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00615Q96LM1 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.22■□□□□ 0.03
LINC00615Q96LM1 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LINC00615Q96LM1 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.22■□□□□ 0.03
LINC00615Q96LM1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms