Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC087499.5-201ENST00000452760 1342 ntBASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
PDLIM5Q96HC4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 SDHAP3-202ENST00000515467 728 ntBASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AC069120.2-201ENST00000524091 540 ntBASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AL512361.1-201ENST00000554200 418 ntBASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AC015910.1-201ENST00000579400 975 ntBASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PDLIM5Q96HC4 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AC148477.4-201ENST00000613430 1793 ntBASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AC015922.1-201ENST00000421102 1152 ntBASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AC107890.1-201ENST00000422478 521 ntBASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 RN7SL618P-201ENST00000477850 296 ntBASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AC125807.1-201ENST00000483097 614 ntBASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AL158211.3-201ENST00000607385 239 ntBASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 AC074044.1-201ENST00000609673 707 ntBASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms