Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDCA5Q96FF9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 PARVG-202ENST00000415224 999 ntTSL 2 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 AC013355.1-201ENST00000562625 723 ntBASIC18.15■□□□□ 0.5
CDCA5Q96FF9 MIR4750-201ENST00000584564 56 ntBASIC18.15■□□□□ 0.5
CDCA5Q96FF9 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 AC011477.6-201ENST00000604980 1927 ntBASIC18.15■□□□□ 0.5
CDCA5Q96FF9 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.15■□□□□ 0.5
CDCA5Q96FF9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDCA5Q96FF9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDCA5Q96FF9 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.14■□□□□ 0.5
CDCA5Q96FF9 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CDCA5Q96FF9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDCA5Q96FF9 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDCA5Q96FF9 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 EIF3FP3-201ENST00000434851 1086 ntBASIC18.14■□□□□ 0.49
CDCA5Q96FF9 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 AL161670.2-201ENST00000557650 1227 ntBASIC18.14■□□□□ 0.49
CDCA5Q96FF9 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 AL023803.2-201ENST00000620080 638 ntBASIC18.14■□□□□ 0.49
CDCA5Q96FF9 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 AC090340.1-201ENST00000620778 4980 ntBASIC18.14■□□□□ 0.49
CDCA5Q96FF9 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 KRT8P14-201ENST00000414254 1442 ntBASIC18.14■□□□□ 0.49
CDCA5Q96FF9 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDCA5Q96FF9 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDCA5Q96FF9 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms