Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 MTND6P24-201ENST00000440466 518 ntBASIC16.04■□□□□ 0.16
RTP4Q96DX8 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RTP4Q96DX8 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTP4Q96DX8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 SLED1-202ENST00000512051 380 ntBASIC16.03■□□□□ 0.16
RTP4Q96DX8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTP4Q96DX8 CICP24-201ENST00000605464 2705 ntBASIC16.03■□□□□ 0.16
RTP4Q96DX8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
RTP4Q96DX8 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 ZBED1P1-201ENST00000502364 1930 ntBASIC16.02■□□□□ 0.16
RTP4Q96DX8 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 FAM45BP-202ENST00000592932 1624 ntBASIC16.02■□□□□ 0.16
RTP4Q96DX8 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 CNN2P2-201ENST00000443536 909 ntBASIC16.02■□□□□ 0.16
RTP4Q96DX8 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 CNN2P3-201ENST00000450201 906 ntBASIC16.02■□□□□ 0.16
RTP4Q96DX8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTP4Q96DX8 DUX4L27-201ENST00000554796 1261 ntBASIC16.02■□□□□ 0.16
RTP4Q96DX8 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.02■□□□□ 0.16
RTP4Q96DX8 AC025048.3-201ENST00000590609 569 ntBASIC16.02■□□□□ 0.16
RTP4Q96DX8 AC005702.4-201ENST00000618393 416 ntBASIC16.02■□□□□ 0.16
RTP4Q96DX8 AL136317.3-201ENST00000618497 906 ntBASIC16.02■□□□□ 0.16
RTP4Q96DX8 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms