Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 CSNK1G2P1-201ENST00000442675 955 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AP003040.1-201ENST00000532044 1024 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 U82695.1-201ENST00000635752 1889 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 MIR345-201ENST00000362114 98 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 METTL5-203ENST00000392640 800 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 RN7SL147P-201ENST00000487345 298 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 CCNC-217ENST00000523985 958 ntTSL 2 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 AC124944.3-201ENST00000607976 1304 ntBASIC6.15□□□□□ -1.42
SYNE2Q8WXH0 CYP2AB1P-202ENST00000454440 1456 ntBASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 FZD10-202ENST00000539839 3282 ntBASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 AL589666.1-201ENST00000503906 835 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 PAX6-247ENST00000638965 979 ntTSL 5 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 PPY-202ENST00000587006 431 ntTSL 3 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC6.15□□□□□ -1.43
SYNE2Q8WXH0 FRMD8P1-201ENST00000440433 1524 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 AL139094.1-201ENST00000405549 1188 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 WDR54-202ENST00000409791 854 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 RPL3P5-201ENST00000441645 1232 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 RN7SL605P-201ENST00000577229 281 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 RN7SL524P-201ENST00000581152 300 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 PRR20FP-201ENST00000603320 180 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 KRT8P39-201ENST00000396270 1433 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 OR52V1P-201ENST00000515557 898 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 RNA5SP417-201ENST00000516459 108 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 AC138701.2-201ENST00000553634 226 ntBASIC6.14□□□□□ -1.43
SYNE2Q8WXH0 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms