Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 FAM58DP-201ENST00000428076 619 ntBASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 PHKG1P2-201ENST00000457537 863 ntBASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TRAF3IP1Q8TDR0 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 AC144831.1-201ENST00000573312 2656 ntBASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRAF3IP1Q8TDR0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms