Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 AC025048.3-201ENST00000590609 569 ntBASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 AC005702.4-201ENST00000618393 416 ntBASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDH19Q8TAB3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 Z97205.2-201ENST00000564697 1639 ntBASIC16.27■□□□□ 0.19
PCDH19Q8TAB3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 AC140878.1-201ENST00000565277 250 ntBASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 AC073592.8-201ENST00000624126 511 ntBASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDH19Q8TAB3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC092580.3-201ENST00000430932 139 ntBASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC055876.3-201ENST00000431496 288 ntBASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 KRT18P64-201ENST00000434946 1219 ntBASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 RNA5SP421-201ENST00000516864 134 ntBASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC069120.2-201ENST00000524091 540 ntBASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC010336.2-201ENST00000564226 506 ntBASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms