Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 AC023511.2-201ENST00000618803 211 ntBASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 SNX18-202ENST00000343017 3140 ntBASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 REXO1L8P-201ENST00000604378 1897 ntBASIC16.08■□□□□ 0.16
CFAP61Q8NHU2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 MIR1233-2-201ENST00000408138 82 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 MIR1233-1-201ENST00000408722 82 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 RPS8P6-201ENST00000426177 609 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 POU5F1P6-201ENST00000466990 990 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 RN7SL589P-201ENST00000481268 310 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 AC079140.1-201ENST00000508039 487 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 IGHV3-62-201ENST00000520057 340 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 AC243562.1-201ENST00000560672 389 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 AC027307.2-201ENST00000591252 911 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 AC055717.3-201ENST00000622967 595 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 SSR4P1-203ENST00000599569 2260 ntBASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CFAP61Q8NHU2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 LINC02447-202ENST00000501888 2146 ntBASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.06■□□□□ 0.16
CFAP61Q8NHU2 ADH5P3-201ENST00000433842 1137 ntBASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms