Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 REXO1L4P-201ENST00000605109 1937 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AL662844.4-201ENST00000606367 2838 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RN7SL720P-201ENST00000488178 304 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RERG-205ENST00000537647 935 ntTSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 MIR3907-201ENST00000579424 151 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 AC127383.1-201ENST00000444697 1800 ntBASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
COL27A1Q8IZC6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 AP000593.2-201ENST00000542775 1433 ntBASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
COL27A1Q8IZC6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms