Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK2Q86Y07 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK2Q86Y07 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 UPF3AP3-201ENST00000420996 769 ntBASIC14.6□□□□□ -0.07
VRK2Q86Y07 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VRK2Q86Y07 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK2Q86Y07 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK2Q86Y07 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK2Q86Y07 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.6□□□□□ -0.07
VRK2Q86Y07 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VRK2Q86Y07 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
VRK2Q86Y07 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 MTND6P24-201ENST00000440466 518 ntBASIC14.59□□□□□ -0.07
VRK2Q86Y07 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 RN7SL828P-201ENST00000607615 303 ntBASIC14.59□□□□□ -0.07
VRK2Q86Y07 AC009093.7-201ENST00000623853 1223 ntBASIC14.59□□□□□ -0.07
VRK2Q86Y07 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 LINC02228-204ENST00000642115 2962 ntBASIC14.59□□□□□ -0.07
VRK2Q86Y07 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VRK2Q86Y07 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.59□□□□□ -0.07
VRK2Q86Y07 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.58□□□□□ -0.07
VRK2Q86Y07 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VRK2Q86Y07 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.58□□□□□ -0.07
VRK2Q86Y07 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.58□□□□□ -0.07
VRK2Q86Y07 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms