Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AC006449.5-201ENST00000610658 2098 ntBASIC17.54■□□□□ 0.4
TRIM50Q86XT4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRIM50Q86XT4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 MSTO2P-201ENST00000314835 1709 ntBASIC17.53■□□□□ 0.4
TRIM50Q86XT4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 AC069224.1-201ENST00000566372 1715 ntBASIC17.53■□□□□ 0.4
TRIM50Q86XT4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 C1QBPP1-201ENST00000400117 770 ntBASIC17.53■□□□□ 0.4
TRIM50Q86XT4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 KRT18P43-201ENST00000469825 1281 ntBASIC17.53■□□□□ 0.4
TRIM50Q86XT4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 SLC25A47P1-201ENST00000531577 414 ntBASIC17.53■□□□□ 0.4
TRIM50Q86XT4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 MIR4313-201ENST00000580760 101 ntBASIC17.53■□□□□ 0.4
TRIM50Q86XT4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM50Q86XT4 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 SOCS2P1-201ENST00000417727 557 ntBASIC17.52■□□□□ 0.4
TRIM50Q86XT4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 AC000095.1-201ENST00000603208 874 ntBASIC17.52■□□□□ 0.4
TRIM50Q86XT4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM50Q86XT4 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRIM50Q86XT4 AC084018.2-201ENST00000613093 2607 ntBASIC17.51■□□□□ 0.39
TRIM50Q86XT4 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM50Q86XT4 ACTG1P3-201ENST00000431775 1114 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms