Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AC074338.1-201ENST00000416825 156 ntBASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AC140878.1-201ENST00000565277 250 ntBASIC14.29□□□□□ -0.12
ATG4DQ86TL0 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 TEX28P1-201ENST00000613479 1221 ntBASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AL138828.2-201ENST00000615812 383 ntBASIC14.29□□□□□ -0.12
ATG4DQ86TL0 TEX28P2-201ENST00000617764 1221 ntBASIC14.29□□□□□ -0.12
ATG4DQ86TL0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 Z97205.2-201ENST00000564697 1639 ntBASIC14.29□□□□□ -0.12
ATG4DQ86TL0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
ATG4DQ86TL0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 MIR661-201ENST00000384842 89 ntBASIC14.28□□□□□ -0.12
ATG4DQ86TL0 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 AC092580.3-201ENST00000430932 139 ntBASIC14.28□□□□□ -0.12
ATG4DQ86TL0 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 KRT8P44-201ENST00000441609 1350 ntBASIC14.28□□□□□ -0.12
ATG4DQ86TL0 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 AC025048.3-201ENST00000590609 569 ntBASIC14.28□□□□□ -0.12
ATG4DQ86TL0 AC005702.4-201ENST00000618393 416 ntBASIC14.28□□□□□ -0.12
ATG4DQ86TL0 AC073592.8-201ENST00000624126 511 ntBASIC14.28□□□□□ -0.12
ATG4DQ86TL0 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ATG4DQ86TL0 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
ATG4DQ86TL0 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms