Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RPS15-201ENST00000233609 534 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 KLF2P1-201ENST00000447438 1042 ntBASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 MBP-227ENST00000526111 581 ntTSL 4 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RPS15-205ENST00000586686 562 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RPS15-208ENST00000591804 711 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 GMFG-209ENST00000600322 622 ntTSL 5 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RN7SL736P-201ENST00000613111 269 ntBASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RN7SKP214-201ENST00000364208 315 ntBASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 RCC2P8-201ENST00000502779 1035 ntBASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 AC026434.2-201ENST00000506094 1078 ntBASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 KRT8P4-201ENST00000509735 1454 ntBASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
VPS13DQ5THJ4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 CTBP2P4-201ENST00000513884 920 ntBASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 RPL17P45-201ENST00000586289 509 ntBASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 LINC02447-202ENST00000501888 2146 ntBASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 SAMD11P1-201ENST00000571429 661 ntBASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 ACTBP8-201ENST00000403258 1108 ntBASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 Z97180.1-201ENST00000445173 988 ntBASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 IQSEC3P1-201ENST00000538799 536 ntBASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
VPS13DQ5THJ4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC022616.1-201ENST00000518688 554 ntBASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 NEU3-205ENST00000531619 582 ntTSL 5 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms