Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 ZBED1P1-201ENST00000502364 1930 ntBASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 MIR4313-201ENST00000580760 101 ntBASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 MIR4515-201ENST00000584082 81 ntBASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ANKRD55Q3KP44 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 HMGA1P7-201ENST00000406908 502 ntBASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 PMS2P4-201ENST00000412466 1052 ntBASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 MIR3909-201ENST00000579518 119 ntBASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 AC006557.2-201ENST00000592985 1240 ntBASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 CICP14-201ENST00000629111 2732 ntBASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ANKRD55Q3KP44 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ANKRD55Q3KP44 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms