Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCGF3Q3KNV8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 UXT-AS1-201ENST00000590504 1525 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AC105233.2-201ENST00000523697 349 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AF228730.5-201ENST00000530288 346 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AC027307.2-201ENST00000591252 911 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AC027612.4-201ENST00000605371 583 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AC084121.4-201ENST00000641598 221 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AF228730.8-201ENST00000642140 221 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 AL109954.1-202ENST00000564051 2148 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.06□□□□□ -0.16
PCGF3Q3KNV8 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 TMBIM7P-203ENST00000641617 1718 ntBASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 AC004449.1-201ENST00000564240 433 ntBASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
PCGF3Q3KNV8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms