Protein–RNA interactions for Protein: Q15032

R3HDM1, R3H domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1Q15032 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
R3HDM1Q15032 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
R3HDM1Q15032 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 COX20P1-201ENST00000366529 357 ntBASIC19.41■□□□□ 0.7
R3HDM1Q15032 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 AL357563.1-201ENST00000404728 395 ntBASIC19.41■□□□□ 0.7
R3HDM1Q15032 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 AL627422.1-201ENST00000434104 580 ntBASIC19.41■□□□□ 0.7
R3HDM1Q15032 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 AC087392.5-201ENST00000612517 489 ntBASIC19.41■□□□□ 0.7
R3HDM1Q15032 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 AC005618.3-201ENST00000624928 458 ntBASIC19.41■□□□□ 0.7
R3HDM1Q15032 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.41■□□□□ 0.7
R3HDM1Q15032 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
R3HDM1Q15032 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 IL9RP3-201ENST00000442856 1674 ntBASIC19.4■□□□□ 0.7
R3HDM1Q15032 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 HLA-J-204ENST00000495278 958 ntBASIC19.4■□□□□ 0.7
R3HDM1Q15032 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 PTPN20CP-201ENST00000614090 920 ntBASIC19.4■□□□□ 0.7
R3HDM1Q15032 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 AC002472.4-201ENST00000641915 272 ntBASIC19.4■□□□□ 0.7
R3HDM1Q15032 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 BICD1-207ENST00000551848 1962 ntBASIC19.4■□□□□ 0.7
R3HDM1Q15032 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
R3HDM1Q15032 AMT-224ENST00000635808 1610 ntTSL 5 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.4■□□□□ 0.7
R3HDM1Q15032 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
R3HDM1Q15032 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.39■□□□□ 0.7
R3HDM1Q15032 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
R3HDM1Q15032 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 NAT9-220ENST00000582870 896 ntTSL 5 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 MIR4522-201ENST00000584932 87 ntBASIC19.39■□□□□ 0.69
R3HDM1Q15032 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 AL627230.2-201ENST00000613254 655 ntBASIC19.39■□□□□ 0.69
R3HDM1Q15032 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 AP001282.1-201ENST00000531301 1499 ntBASIC19.39■□□□□ 0.69
R3HDM1Q15032 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
R3HDM1Q15032 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
R3HDM1Q15032 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms