Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 CXCL1P1-201ENST00000502804 216 ntBASIC13.37□□□□□ -0.27
SSBP1Q04837 AC024267.1-201ENST00000582320 895 ntBASIC13.37□□□□□ -0.27
SSBP1Q04837 AL450472.2-201ENST00000603663 1156 ntBASIC13.37□□□□□ -0.27
SSBP1Q04837 AC008608.2-201ENST00000606089 416 ntBASIC13.37□□□□□ -0.27
SSBP1Q04837 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 MIR1199-201ENST00000621445 119 ntBASIC13.37□□□□□ -0.27
SSBP1Q04837 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SSBP1Q04837 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.37□□□□□ -0.27
SSBP1Q04837 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.37□□□□□ -0.27
SSBP1Q04837 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.37□□□□□ -0.27
SSBP1Q04837 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SSBP1Q04837 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 REXO1L2P-201ENST00000425429 2069 ntBASIC13.36□□□□□ -0.27
SSBP1Q04837 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
SSBP1Q04837 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SSBP1Q04837 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SSBP1Q04837 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP1Q04837 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 PCED1CP-201ENST00000419887 785 ntBASIC13.36□□□□□ -0.27
SSBP1Q04837 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.36□□□□□ -0.27
SSBP1Q04837 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP1Q04837 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP1Q04837 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.36□□□□□ -0.27
SSBP1Q04837 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC13.36□□□□□ -0.27
SSBP1Q04837 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.36□□□□□ -0.27
SSBP1Q04837 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.36□□□□□ -0.27
SSBP1Q04837 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
SSBP1Q04837 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
SSBP1Q04837 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
SSBP1Q04837 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
SSBP1Q04837 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.35□□□□□ -0.27
SSBP1Q04837 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 IER3-202ENST00000376377 1350 ntBASIC13.35□□□□□ -0.27
SSBP1Q04837 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.35□□□□□ -0.27
SSBP1Q04837 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSBP1Q04837 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSBP1Q04837 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
SSBP1Q04837 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP1Q04837 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
SSBP1Q04837 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms