Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 DGCR5-201ENST00000399539 862 ntBASIC13.98□□□□□ -0.17
NKX6-1P78426 AL512384.1-201ENST00000406683 331 ntBASIC13.98□□□□□ -0.17
NKX6-1P78426 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
NKX6-1P78426 AC135586.1-201ENST00000539323 574 ntBASIC13.98□□□□□ -0.17
NKX6-1P78426 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
NKX6-1P78426 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 AC105021.1-202ENST00000570572 669 ntBASIC13.98□□□□□ -0.17
NKX6-1P78426 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 MIR6805-201ENST00000615055 62 ntBASIC13.98□□□□□ -0.17
NKX6-1P78426 AL162274.1-201ENST00000617191 1098 ntBASIC13.98□□□□□ -0.17
NKX6-1P78426 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.98□□□□□ -0.17
NKX6-1P78426 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.98□□□□□ -0.17
NKX6-1P78426 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
NKX6-1P78426 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.98□□□□□ -0.17
NKX6-1P78426 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NKX6-1P78426 AC022188.1-201ENST00000620960 1664 ntBASIC13.98□□□□□ -0.17
NKX6-1P78426 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
NKX6-1P78426 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
NKX6-1P78426 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX6-1P78426 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX6-1P78426 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
NKX6-1P78426 DFFBP1-201ENST00000433250 979 ntBASIC13.97□□□□□ -0.17
NKX6-1P78426 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NKX6-1P78426 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.97□□□□□ -0.17
NKX6-1P78426 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
NKX6-1P78426 AC104794.3-201ENST00000566840 1248 ntBASIC13.97□□□□□ -0.17
NKX6-1P78426 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.97□□□□□ -0.17
NKX6-1P78426 RN7SL828P-201ENST00000607615 303 ntBASIC13.97□□□□□ -0.17
NKX6-1P78426 IGHV3-72-202ENST00000621503 303 ntBASIC13.97□□□□□ -0.17
NKX6-1P78426 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NKX6-1P78426 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
NKX6-1P78426 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NKX6-1P78426 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.97□□□□□ -0.17
NKX6-1P78426 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NKX6-1P78426 LINC02228-204ENST00000642115 2962 ntBASIC13.97□□□□□ -0.17
NKX6-1P78426 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NKX6-1P78426 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NKX6-1P78426 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NKX6-1P78426 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NKX6-1P78426 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NKX6-1P78426 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.96□□□□□ -0.17
NKX6-1P78426 AL662844.4-201ENST00000606367 2838 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms