Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
PRAMEP78395 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PRAMEP78395 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.97■□□□□ 0.15
PRAMEP78395 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRAMEP78395 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.97■□□□□ 0.15
PRAMEP78395 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PRAMEP78395 AC092127.1-201ENST00000567093 3455 ntBASIC15.96■□□□□ 0.15
PRAMEP78395 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRAMEP78395 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PRAMEP78395 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.96■□□□□ 0.15
PRAMEP78395 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PRAMEP78395 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
PRAMEP78395 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PRAMEP78395 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PRAMEP78395 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
PRAMEP78395 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.96■□□□□ 0.15
PRAMEP78395 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.96■□□□□ 0.15
PRAMEP78395 AC004967.1-201ENST00000453589 447 ntBASIC15.96■□□□□ 0.15
PRAMEP78395 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.96■□□□□ 0.15
PRAMEP78395 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.96■□□□□ 0.15
PRAMEP78395 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 MIR6080-201ENST00000617359 66 ntBASIC15.96■□□□□ 0.15
PRAMEP78395 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.96■□□□□ 0.15
PRAMEP78395 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRAMEP78395 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PRAMEP78395 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
PRAMEP78395 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.96■□□□□ 0.14
PRAMEP78395 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PRAMEP78395 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.96■□□□□ 0.14
PRAMEP78395 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PRAMEP78395 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PRAMEP78395 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.95■□□□□ 0.14
PRAMEP78395 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.95■□□□□ 0.14
PRAMEP78395 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.95■□□□□ 0.14
PRAMEP78395 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
PRAMEP78395 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.95■□□□□ 0.14
PRAMEP78395 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 SPDYE7P-202ENST00000420373 878 ntBASIC15.95■□□□□ 0.14
PRAMEP78395 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.95■□□□□ 0.14
PRAMEP78395 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.95■□□□□ 0.14
PRAMEP78395 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 PHKG1P2-201ENST00000457537 863 ntBASIC15.95■□□□□ 0.14
PRAMEP78395 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.95■□□□□ 0.14
PRAMEP78395 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC15.95■□□□□ 0.14
PRAMEP78395 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.95■□□□□ 0.14
PRAMEP78395 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.95■□□□□ 0.14
PRAMEP78395 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PRAMEP78395 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.95■□□□□ 0.14
PRAMEP78395 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
PRAMEP78395 AL596442.2-201ENST00000610240 980 ntBASIC15.95■□□□□ 0.14
PRAMEP78395 RAB34-224ENST00000636513 888 ntTSL 5 BASIC15.95■□□□□ 0.14
PRAMEP78395 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.95■□□□□ 0.14
PRAMEP78395 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.95■□□□□ 0.14
PRAMEP78395 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.95■□□□□ 0.14
PRAMEP78395 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PRAMEP78395 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PRAMEP78395 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms