Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC11.29□□□□□ -0.6
UBE2D3P61077 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC11.29□□□□□ -0.6
UBE2D3P61077 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.29□□□□□ -0.6
UBE2D3P61077 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D3P61077 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC11.29□□□□□ -0.6
UBE2D3P61077 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.29□□□□□ -0.6
UBE2D3P61077 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D3P61077 AC099522.2-201ENST00000607001 744 ntBASIC11.29□□□□□ -0.6
UBE2D3P61077 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 AL513190.1-201ENST00000621254 727 ntBASIC11.29□□□□□ -0.6
UBE2D3P61077 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 AC005912.2-201ENST00000619492 2400 ntBASIC11.29□□□□□ -0.6
UBE2D3P61077 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 AKAP8P1-201ENST00000434743 1349 ntBASIC11.29□□□□□ -0.6
UBE2D3P61077 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 SSR4P1-203ENST00000599569 2260 ntBASIC11.29□□□□□ -0.6
UBE2D3P61077 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC11.29□□□□□ -0.6
UBE2D3P61077 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D3P61077 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
UBE2D3P61077 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
UBE2D3P61077 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
UBE2D3P61077 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2D3P61077 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D3P61077 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D3P61077 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
UBE2D3P61077 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
UBE2D3P61077 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
UBE2D3P61077 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D3P61077 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2D3P61077 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D3P61077 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
UBE2D3P61077 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2D3P61077 AL591424.1-201ENST00000442569 1213 ntBASIC11.28□□□□□ -0.6
UBE2D3P61077 AC243562.2-201ENST00000561247 970 ntBASIC11.28□□□□□ -0.6
UBE2D3P61077 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC11.28□□□□□ -0.6
UBE2D3P61077 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.28□□□□□ -0.6
UBE2D3P61077 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D3P61077 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2D3P61077 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.28□□□□□ -0.6
UBE2D3P61077 SPTSSB-204ENST00000617024 1292 ntBASIC11.28□□□□□ -0.6
UBE2D3P61077 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.28□□□□□ -0.6
UBE2D3P61077 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D3P61077 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D3P61077 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
UBE2D3P61077 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
UBE2D3P61077 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
UBE2D3P61077 AC009090.5-201ENST00000624886 2285 ntBASIC11.28□□□□□ -0.6
UBE2D3P61077 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
UBE2D3P61077 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.28□□□□□ -0.6
UBE2D3P61077 AC232323.1-201ENST00000540724 2099 ntBASIC11.28□□□□□ -0.6
UBE2D3P61077 REXO1L5P-201ENST00000622260 2098 ntBASIC11.28□□□□□ -0.6
UBE2D3P61077 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms