Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
CDH12P55289 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
CDH12P55289 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
CDH12P55289 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CDH12P55289 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CDH12P55289 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH12P55289 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH12P55289 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CDH12P55289 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH12P55289 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH12P55289 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH12P55289 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH12P55289 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH12P55289 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 AC007326.2-201ENST00000624224 7579 ntBASIC14.76□□□□□ -0.05
CDH12P55289 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CDH12P55289 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.76□□□□□ -0.05
CDH12P55289 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDH12P55289 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.76□□□□□ -0.05
CDH12P55289 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH12P55289 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CDH12P55289 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.76□□□□□ -0.05
CDH12P55289 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDH12P55289 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.76□□□□□ -0.05
CDH12P55289 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.76□□□□□ -0.05
CDH12P55289 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
CDH12P55289 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CDH12P55289 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.76□□□□□ -0.05
CDH12P55289 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CDH12P55289 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.75□□□□□ -0.05
CDH12P55289 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
CDH12P55289 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
CDH12P55289 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.75□□□□□ -0.05
CDH12P55289 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.75□□□□□ -0.05
CDH12P55289 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.75□□□□□ -0.05
CDH12P55289 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 AC073389.1-201ENST00000595595 795 ntBASIC14.75□□□□□ -0.05
CDH12P55289 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.75□□□□□ -0.05
CDH12P55289 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CDH12P55289 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.75□□□□□ -0.05
CDH12P55289 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms