Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.53□□□□□ -0.08
CDH11P55287 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
CDH11P55287 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 AC099522.2-201ENST00000607001 744 ntBASIC14.53□□□□□ -0.08
CDH11P55287 AL365330.1-201ENST00000607459 531 ntBASIC14.53□□□□□ -0.08
CDH11P55287 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 AC106028.4-201ENST00000614509 607 ntBASIC14.53□□□□□ -0.08
CDH11P55287 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDH11P55287 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.53□□□□□ -0.08
CDH11P55287 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDH11P55287 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CDH11P55287 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH11P55287 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
CDH11P55287 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH11P55287 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH11P55287 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH11P55287 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH11P55287 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.52□□□□□ -0.08
CDH11P55287 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDH11P55287 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDH11P55287 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
CDH11P55287 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDH11P55287 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
CDH11P55287 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 AL645939.2-201ENST00000427340 991 ntBASIC14.52□□□□□ -0.09
CDH11P55287 ADH5P3-201ENST00000433842 1137 ntBASIC14.52□□□□□ -0.09
CDH11P55287 HMGN1P19-201ENST00000436976 333 ntBASIC14.52□□□□□ -0.09
CDH11P55287 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 AC023141.5-201ENST00000458585 616 ntBASIC14.52□□□□□ -0.09
CDH11P55287 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 RFPL4AP1-201ENST00000530883 850 ntBASIC14.52□□□□□ -0.09
CDH11P55287 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
CDH11P55287 AC004449.1-201ENST00000564240 433 ntBASIC14.52□□□□□ -0.09
CDH11P55287 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDH11P55287 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 AC026120.1-201ENST00000611536 926 ntBASIC14.52□□□□□ -0.09
CDH11P55287 AL161645.1-201ENST00000622716 1255 ntBASIC14.52□□□□□ -0.09
CDH11P55287 AC093028.1-201ENST00000622998 982 ntBASIC14.52□□□□□ -0.09
CDH11P55287 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
CDH11P55287 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.52□□□□□ -0.09
CDH11P55287 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CDH11P55287 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CDH11P55287 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CDH11P55287 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.52□□□□□ -0.09
CDH11P55287 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDH11P55287 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.52□□□□□ -0.09
CDH11P55287 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 AC105250.1-201ENST00000509378 2057 ntBASIC14.51□□□□□ -0.09
CDH11P55287 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
CDH11P55287 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CDH11P55287 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDH11P55287 AC090616.6-203ENST00000579186 1945 ntBASIC14.51□□□□□ -0.09
CDH11P55287 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CDH11P55287 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.51□□□□□ -0.09
CDH11P55287 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms