Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.06■□□□□ 0
NR1H2P55055 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.06■□□□□ 0
NR1H2P55055 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.06■□□□□ 0
NR1H2P55055 GGTLC5P-201ENST00000617623 998 ntBASIC15.06■□□□□ 0
NR1H2P55055 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.06■□□□□ 0
NR1H2P55055 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.06■□□□□ 0
NR1H2P55055 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 PCGF3-213ENST00000620529 1899 ntBASIC15.06■□□□□ 0
NR1H2P55055 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR1H2P55055 ABR-228ENST00000574437 3196 ntTSL 5 BASIC15.06■□□□□ 0
NR1H2P55055 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
NR1H2P55055 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.05■□□□□ 0
NR1H2P55055 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
NR1H2P55055 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
NR1H2P55055 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
NR1H2P55055 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
NR1H2P55055 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.05■□□□□ 0
NR1H2P55055 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NR1H2P55055 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NR1H2P55055 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NR1H2P55055 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.05■□□□□ -0
NR1H2P55055 VN2R19P-201ENST00000442399 1052 ntBASIC15.05■□□□□ -0
NR1H2P55055 AC108073.2-201ENST00000464002 357 ntBASIC15.05■□□□□ -0
NR1H2P55055 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.05■□□□□ -0
NR1H2P55055 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.05■□□□□ -0
NR1H2P55055 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.05■□□□□ -0
NR1H2P55055 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.05■□□□□ -0
NR1H2P55055 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.05■□□□□ -0
NR1H2P55055 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
NR1H2P55055 AC009090.5-201ENST00000624886 2285 ntBASIC15.05■□□□□ -0
NR1H2P55055 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
NR1H2P55055 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.05■□□□□ -0
NR1H2P55055 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NR1H2P55055 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.05■□□□□ -0
NR1H2P55055 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.04■□□□□ -0
NR1H2P55055 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 SNX33P1-201ENST00000592116 1762 ntBASIC15.04■□□□□ -0
NR1H2P55055 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
NR1H2P55055 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.04■□□□□ -0
NR1H2P55055 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.04■□□□□ -0
NR1H2P55055 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 AP002414.1-201ENST00000391405 1147 ntBASIC15.04■□□□□ -0
NR1H2P55055 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NR1H2P55055 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.04■□□□□ -0
NR1H2P55055 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.04■□□□□ -0
NR1H2P55055 AC112482.1-201ENST00000492080 688 ntBASIC15.04■□□□□ -0
NR1H2P55055 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms