Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC17.34■□□□□ 0.37
PMS1P54277 AL645939.2-201ENST00000427340 991 ntBASIC17.34■□□□□ 0.37
PMS1P54277 CNN2P11-201ENST00000429351 262 ntBASIC17.34■□□□□ 0.37
PMS1P54277 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.34■□□□□ 0.37
PMS1P54277 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.34■□□□□ 0.37
PMS1P54277 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.34■□□□□ 0.37
PMS1P54277 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC17.34■□□□□ 0.37
PMS1P54277 AC109322.1-201ENST00000524499 1264 ntBASIC17.34■□□□□ 0.37
PMS1P54277 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.34■□□□□ 0.37
PMS1P54277 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.34■□□□□ 0.37
PMS1P54277 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
PMS1P54277 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.34■□□□□ 0.37
PMS1P54277 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.34■□□□□ 0.37
PMS1P54277 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PMS1P54277 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
PMS1P54277 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC17.34■□□□□ 0.37
PMS1P54277 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PMS1P54277 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMS1P54277 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PMS1P54277 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMS1P54277 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMS1P54277 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMS1P54277 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMS1P54277 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMS1P54277 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMS1P54277 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PMS1P54277 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 AL035456.1-201ENST00000456064 1369 ntBASIC17.33■□□□□ 0.36
PMS1P54277 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.33■□□□□ 0.36
PMS1P54277 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 AL139400.1-201ENST00000366220 510 ntBASIC17.33■□□□□ 0.36
PMS1P54277 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.33■□□□□ 0.36
PMS1P54277 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.33■□□□□ 0.36
PMS1P54277 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.33■□□□□ 0.36
PMS1P54277 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.33■□□□□ 0.36
PMS1P54277 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.33■□□□□ 0.36
PMS1P54277 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PMS1P54277 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PMS1P54277 AL596442.2-201ENST00000610240 980 ntBASIC17.33■□□□□ 0.36
PMS1P54277 AL513477.1-201ENST00000602865 2407 ntBASIC17.33■□□□□ 0.36
PMS1P54277 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.33■□□□□ 0.36
PMS1P54277 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PMS1P54277 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
PMS1P54277 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.33■□□□□ 0.36
PMS1P54277 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.33■□□□□ 0.36
PMS1P54277 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PMS1P54277 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
PMS1P54277 AC148477.4-201ENST00000613430 1793 ntBASIC17.33■□□□□ 0.36
PMS1P54277 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PMS1P54277 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.33■□□□□ 0.36
PMS1P54277 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PMS1P54277 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC17.32■□□□□ 0.36
PMS1P54277 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.32■□□□□ 0.36
PMS1P54277 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PMS1P54277 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.32■□□□□ 0.36
PMS1P54277 KRT18P64-201ENST00000434946 1219 ntBASIC17.32■□□□□ 0.36
PMS1P54277 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.32■□□□□ 0.36
PMS1P54277 AL512356.2-201ENST00000546955 174 ntBASIC17.32■□□□□ 0.36
PMS1P54277 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
PMS1P54277 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PMS1P54277 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PMS1P54277 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.32■□□□□ 0.36
PMS1P54277 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PMS1P54277 AC068418.2-201ENST00000577309 3703 ntBASIC17.32■□□□□ 0.36
PMS1P54277 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms